Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CKS2P33552 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CKS2P33552 AC093719.1-202ENST00000392735 373 ntBASIC3.18□□□□□ -1.9
CKS2P33552 SDHCP2-201ENST00000398565 501 ntBASIC3.18□□□□□ -1.9
CKS2P33552 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS2P33552 AL513325.1-201ENST00000417716 1034 ntBASIC3.18□□□□□ -1.9
CKS2P33552 VN1R3-201ENST00000418822 919 ntBASIC3.18□□□□□ -1.9
CKS2P33552 ARAFP1-201ENST00000422172 605 ntBASIC3.18□□□□□ -1.9
CKS2P33552 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.18□□□□□ -1.9
CKS2P33552 AL391219.1-201ENST00000422570 483 ntBASIC3.18□□□□□ -1.9
CKS2P33552 RPS26P47-201ENST00000427219 348 ntBASIC3.18□□□□□ -1.9
CKS2P33552 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS2P33552 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS2P33552 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS2P33552 RPS27AP17-201ENST00000463344 455 ntBASIC3.18□□□□□ -1.9
CKS2P33552 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS2P33552 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS2P33552 PRELID3BP7-201ENST00000503606 469 ntBASIC3.18□□□□□ -1.9
CKS2P33552 AC108145.1-201ENST00000503770 153 ntBASIC3.18□□□□□ -1.9
CKS2P33552 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS2P33552 GAPDHP56-201ENST00000506031 988 ntBASIC3.18□□□□□ -1.9
CKS2P33552 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS2P33552 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS2P33552 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS2P33552 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS2P33552 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS2P33552 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS2P33552 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS2P33552 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS2P33552 AC068446.3-201ENST00000555285 382 ntBASIC3.18□□□□□ -1.9
CKS2P33552 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CKS2P33552 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS2P33552 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS2P33552 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.18□□□□□ -1.9
CKS2P33552 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC3.18□□□□□ -1.9
CKS2P33552 MIR6889-201ENST00000613185 59 ntBASIC3.18□□□□□ -1.9
CKS2P33552 AL121873.1-201ENST00000616013 524 ntBASIC3.18□□□□□ -1.9
CKS2P33552 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS2P33552 MIR7702-201ENST00000621931 59 ntBASIC3.18□□□□□ -1.9
CKS2P33552 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS2P33552 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS2P33552 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS2P33552 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CKS2P33552 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CKS2P33552 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS2P33552 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CKS2P33552 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CKS2P33552 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CKS2P33552 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CKS2P33552 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS2P33552 AC010132.2-201ENST00000295493 1043 ntBASIC3.17□□□□□ -1.9
CKS2P33552 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
CKS2P33552 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.17□□□□□ -1.9
CKS2P33552 SNORA3C-201ENST00000408792 125 ntBASIC3.17□□□□□ -1.9
CKS2P33552 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CKS2P33552 AC099336.2-201ENST00000422457 254 ntBASIC3.17□□□□□ -1.9
CKS2P33552 RPEP2-201ENST00000432149 701 ntBASIC3.17□□□□□ -1.9
CKS2P33552 RPS6P12-201ENST00000432491 726 ntBASIC3.17□□□□□ -1.9
CKS2P33552 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.17□□□□□ -1.9
CKS2P33552 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.17□□□□□ -1.9
CKS2P33552 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.17□□□□□ -1.9
CKS2P33552 AC099063.2-201ENST00000446360 662 ntBASIC3.17□□□□□ -1.9
CKS2P33552 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS2P33552 OR1H1P-201ENST00000448731 937 ntBASIC3.17□□□□□ -1.9
CKS2P33552 AC099560.2-201ENST00000457554 255 ntBASIC3.17□□□□□ -1.9
CKS2P33552 AC090114.3-201ENST00000479267 829 ntBASIC3.17□□□□□ -1.9
CKS2P33552 RN7SL205P-201ENST00000490174 284 ntBASIC3.17□□□□□ -1.9
CKS2P33552 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CKS2P33552 SCARNA22-201ENST00000503991 125 ntBASIC3.17□□□□□ -1.9
CKS2P33552 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.17□□□□□ -1.9
CKS2P33552 RNA5SP473-201ENST00000516402 125 ntBASIC3.17□□□□□ -1.9
CKS2P33552 RN7SKP66-201ENST00000516681 231 ntBASIC3.17□□□□□ -1.9
CKS2P33552 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS2P33552 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.17□□□□□ -1.9
CKS2P33552 DEFB109D-201ENST00000529497 240 ntBASIC3.17□□□□□ -1.9
CKS2P33552 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS2P33552 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS2P33552 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.17□□□□□ -1.9
CKS2P33552 AL352979.3-201ENST00000553515 247 ntBASIC3.17□□□□□ -1.9
CKS2P33552 AC005726.4-201ENST00000582858 458 ntBASIC3.17□□□□□ -1.9
CKS2P33552 AC004477.3-201ENST00000614061 590 ntBASIC3.17□□□□□ -1.9
CKS2P33552 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CKS2P33552 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CKS2P33552 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CKS2P33552 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.17□□□□□ -1.9
CKS2P33552 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CKS2P33552 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.17□□□□□ -1.9
CKS2P33552 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS2P33552 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CKS2P33552 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.16□□□□□ -1.9
CKS2P33552 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CKS2P33552 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKS2P33552 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.16□□□□□ -1.9
CKS2P33552 AC017007.4-201ENST00000503353 1352 ntBASIC3.16□□□□□ -1.9
CKS2P33552 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CKS2P33552 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CKS2P33552 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.16□□□□□ -1.9
CKS2P33552 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CKS2P33552 VPS35P1-201ENST00000563400 1518 ntBASIC3.16□□□□□ -1.9
CKS2P33552 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 1725.4 ms