Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.73□□□□□ -1.49
TM4SF1P30408 EIF2AP4-201ENST00000424793 1781 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TM4SF1P30408 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TM4SF1P30408 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.72□□□□□ -1.49
TM4SF1P30408 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.72□□□□□ -1.49
TM4SF1P30408 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TM4SF1P30408 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM4SF1P30408 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM4SF1P30408 AC005261.4-201ENST00000600047 1385 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.72□□□□□ -1.49
TM4SF1P30408 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TM4SF1P30408 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM4SF1P30408 SNORA79B-201ENST00000410557 148 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 AL139095.3-201ENST00000419672 1203 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.72□□□□□ -1.49
TM4SF1P30408 RGS17P1-201ENST00000423358 553 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 MTND2P11-201ENST00000423638 648 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.72□□□□□ -1.49
TM4SF1P30408 MRPS21P3-201ENST00000436696 262 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 MTND4P15-201ENST00000437913 1033 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 AL691517.1-201ENST00000440833 1235 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TM4SF1P30408 ISCUP1-201ENST00000454451 448 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 AC093166.2-201ENST00000455969 1017 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.72□□□□□ -1.49
TM4SF1P30408 AC105031.1-201ENST00000518550 476 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TM4SF1P30408 MIR3158-1-201ENST00000583596 81 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.72□□□□□ -1.49
TM4SF1P30408 OR4H6P-202ENST00000603819 340 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 AL096803.3-201ENST00000609032 532 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 AC011815.3-201ENST00000624194 473 ntBASIC5.72□□□□□ -1.49
TM4SF1P30408 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TM4SF1P30408 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TM4SF1P30408 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TM4SF1P30408 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM4SF1P30408 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM4SF1P30408 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TM4SF1P30408 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TM4SF1P30408 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.71□□□□□ -1.49
TM4SF1P30408 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM4SF1P30408 SNORD115-48-201ENST00000364764 76 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 ATP5F1P3-201ENST00000397213 657 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.71□□□□□ -1.5
TM4SF1P30408 RPL21P67-201ENST00000402896 478 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.71□□□□□ -1.5
TM4SF1P30408 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.71□□□□□ -1.5
TM4SF1P30408 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.71□□□□□ -1.5
TM4SF1P30408 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.71□□□□□ -1.5
TM4SF1P30408 RPL23AP43-201ENST00000446445 471 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 AC069277.2-201ENST00000454211 432 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 DHFRP3-201ENST00000455595 559 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 snoU13.22-201ENST00000459428 104 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.71□□□□□ -1.5
TM4SF1P30408 AC021087.2-201ENST00000504656 1203 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 PARP4P3-201ENST00000510265 317 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM4SF1P30408 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.71□□□□□ -1.5
TM4SF1P30408 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.71□□□□□ -1.5
TM4SF1P30408 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.71□□□□□ -1.5
TM4SF1P30408 HMGB1P46-201ENST00000520062 610 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.71□□□□□ -1.5
TM4SF1P30408 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.71□□□□□ -1.5
TM4SF1P30408 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.71□□□□□ -1.5
TM4SF1P30408 AC087888.1-201ENST00000550884 1254 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 AC016839.1-201ENST00000578162 867 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.71□□□□□ -1.5
TM4SF1P30408 SNX6P1-201ENST00000601728 1224 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 AC073592.7-201ENST00000623659 507 ntBASIC5.71□□□□□ -1.5
TM4SF1P30408 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM4SF1P30408 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM4SF1P30408 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TM4SF1P30408 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM4SF1P30408 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.71□□□□□ -1.5
TM4SF1P30408 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TM4SF1P30408 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF1P30408 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.7□□□□□ -1.5
TM4SF1P30408 SPATA2P1-201ENST00000431223 2055 ntBASIC5.7□□□□□ -1.5
TM4SF1P30408 RNU4-7P-201ENST00000364758 141 ntBASIC5.7□□□□□ -1.5
TM4SF1P30408 RNU2-72P-201ENST00000411175 163 ntBASIC5.7□□□□□ -1.5
TM4SF1P30408 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.7□□□□□ -1.5
TM4SF1P30408 SETP10-201ENST00000424368 814 ntBASIC5.7□□□□□ -1.5
TM4SF1P30408 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.7□□□□□ -1.5
TM4SF1P30408 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF1P30408 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.7□□□□□ -1.5
TM4SF1P30408 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
TM4SF1P30408 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.7□□□□□ -1.5
TM4SF1P30408 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.7□□□□□ -1.5
TM4SF1P30408 AC021146.7-201ENST00000509604 775 ntBASIC5.7□□□□□ -1.5
TM4SF1P30408 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.7□□□□□ -1.5
TM4SF1P30408 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.7□□□□□ -1.5
TM4SF1P30408 MTCO1P49-201ENST00000523429 802 ntBASIC5.7□□□□□ -1.5
TM4SF1P30408 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF1P30408 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.7□□□□□ -1.5
TM4SF1P30408 AL049830.4-201ENST00000555149 351 ntBASIC5.7□□□□□ -1.5
TM4SF1P30408 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.7□□□□□ -1.5
TM4SF1P30408 AC053481.3-201ENST00000577881 843 ntBASIC5.7□□□□□ -1.5
TM4SF1P30408 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.7□□□□□ -1.5
TM4SF1P30408 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms