Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SMARCA1P28370 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.93□□□□□ -1.46
SMARCA1P28370 AP001029.2-203ENST00000589795 4910 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.93□□□□□ -1.46
SMARCA1P28370 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SMARCA1P28370 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SMARCA1P28370 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SMARCA1P28370 RNU6-244P-201ENST00000391028 104 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 MCTS2P-201ENST00000394552 546 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
SMARCA1P28370 AC233289.1-201ENST00000403700 508 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 AL390316.1-201ENST00000406279 553 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 RN7SKP213-201ENST00000410746 298 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.93□□□□□ -1.46
SMARCA1P28370 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.93□□□□□ -1.46
SMARCA1P28370 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.93□□□□□ -1.46
SMARCA1P28370 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.93□□□□□ -1.46
SMARCA1P28370 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.93□□□□□ -1.46
SMARCA1P28370 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMARCA1P28370 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.93□□□□□ -1.46
SMARCA1P28370 COX6CP13-201ENST00000428703 226 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 ETF1P3-201ENST00000430422 1160 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.93□□□□□ -1.46
SMARCA1P28370 GTF2IP3-201ENST00000433887 494 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.93□□□□□ -1.46
SMARCA1P28370 PRPF38AP1-201ENST00000451976 933 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.93□□□□□ -1.46
SMARCA1P28370 RN7SL443P-201ENST00000464331 290 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 RPSAP50-201ENST00000481955 852 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 RPL21P131-201ENST00000497298 483 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.93□□□□□ -1.46
SMARCA1P28370 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.93□□□□□ -1.46
SMARCA1P28370 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.93□□□□□ -1.46
SMARCA1P28370 UBTFL10-201ENST00000528532 562 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 EIF4A2P5-201ENST00000529914 499 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.93□□□□□ -1.46
SMARCA1P28370 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.93□□□□□ -1.46
SMARCA1P28370 AC087897.1-201ENST00000550134 156 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.93□□□□□ -1.46
SMARCA1P28370 MIR3691-201ENST00000578066 90 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.93□□□□□ -1.46
SMARCA1P28370 AC010503.3-201ENST00000594355 540 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.93□□□□□ -1.46
SMARCA1P28370 AL049844.2-201ENST00000604280 628 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 AC018695.5-201ENST00000605872 315 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.93□□□□□ -1.46
SMARCA1P28370 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMARCA1P28370 MIR7155-201ENST00000615925 56 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 AC037198.3-201ENST00000616754 526 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 AC068870.2-201ENST00000620635 389 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 MIR6719-201ENST00000622428 87 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.93□□□□□ -1.46
SMARCA1P28370 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.93□□□□□ -1.46
SMARCA1P28370 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SMARCA1P28370 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SMARCA1P28370 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMARCA1P28370 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMARCA1P28370 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.93□□□□□ -1.46
SMARCA1P28370 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMARCA1P28370 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SMARCA1P28370 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMARCA1P28370 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMARCA1P28370 SOCS5P3-201ENST00000425115 1576 ntBASIC5.93□□□□□ -1.46
SMARCA1P28370 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.92□□□□□ -1.46
SMARCA1P28370 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMARCA1P28370 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMARCA1P28370 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMARCA1P28370 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SMARCA1P28370 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.92□□□□□ -1.46
SMARCA1P28370 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SMARCA1P28370 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMARCA1P28370 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.92□□□□□ -1.46
SMARCA1P28370 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
SMARCA1P28370 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SMARCA1P28370 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
SMARCA1P28370 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.92□□□□□ -1.46
SMARCA1P28370 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMARCA1P28370 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SMARCA1P28370 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.92□□□□□ -1.46
SMARCA1P28370 RNU6-666P-201ENST00000363499 107 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 RNU4-31P-201ENST00000384211 141 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 RNU6-532P-201ENST00000384318 107 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
SMARCA1P28370 RNU4-22P-201ENST00000411058 166 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 AC079809.1-201ENST00000415468 276 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 LINC01347-201ENST00000417964 355 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.92□□□□□ -1.46
SMARCA1P28370 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.92□□□□□ -1.46
SMARCA1P28370 CEACAMP7-201ENST00000444105 496 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 AC004022.1-201ENST00000447766 1066 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 ZNF886P-201ENST00000450781 723 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.92□□□□□ -1.46
SMARCA1P28370 NAP1L1P3-201ENST00000462291 880 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.92□□□□□ -1.46
SMARCA1P28370 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.92□□□□□ -1.46
SMARCA1P28370 AC005351.1-201ENST00000511152 786 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 RN7SKP66-201ENST00000516681 231 ntBASIC5.92□□□□□ -1.46
SMARCA1P28370 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms