Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.35□□□□□ -1.55
CD40P25942 AC008280.1-201ENST00000418851 412 ntBASIC5.35□□□□□ -1.55
CD40P25942 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CD40P25942 AL389915.1-201ENST00000422463 466 ntBASIC5.35□□□□□ -1.55
CD40P25942 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 AC079807.1-201ENST00000429993 481 ntBASIC5.35□□□□□ -1.55
CD40P25942 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.35□□□□□ -1.55
CD40P25942 FMO7P-201ENST00000436045 768 ntBASIC5.35□□□□□ -1.55
CD40P25942 AC002504.1-201ENST00000438281 691 ntBASIC5.35□□□□□ -1.55
CD40P25942 GAPDHP23-201ENST00000444823 993 ntBASIC5.35□□□□□ -1.55
CD40P25942 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.35□□□□□ -1.55
CD40P25942 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 AC144530.1-201ENST00000452862 555 ntBASIC5.35□□□□□ -1.55
CD40P25942 HMGN3P1-201ENST00000453847 193 ntBASIC5.35□□□□□ -1.55
CD40P25942 AC094085.1-201ENST00000468914 584 ntBASIC5.35□□□□□ -1.55
CD40P25942 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.35□□□□□ -1.55
CD40P25942 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 RNA5SP434-201ENST00000516647 121 ntBASIC5.35□□□□□ -1.55
CD40P25942 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 AP000790.1-201ENST00000528891 737 ntBASIC5.35□□□□□ -1.55
CD40P25942 OR5M2P-201ENST00000529003 936 ntBASIC5.35□□□□□ -1.55
CD40P25942 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.35□□□□□ -1.55
CD40P25942 RPA2P3-201ENST00000533268 770 ntBASIC5.35□□□□□ -1.55
CD40P25942 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 AC079905.1-201ENST00000549280 475 ntBASIC5.35□□□□□ -1.55
CD40P25942 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 AC074029.1-201ENST00000552531 1044 ntBASIC5.35□□□□□ -1.55
CD40P25942 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 OR11J2P-201ENST00000555298 907 ntBASIC5.35□□□□□ -1.55
CD40P25942 EIF5A2P1-201ENST00000564027 460 ntBASIC5.35□□□□□ -1.55
CD40P25942 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 AC083760.1-201ENST00000589621 670 ntBASIC5.35□□□□□ -1.55
CD40P25942 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.35□□□□□ -1.55
CD40P25942 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.35□□□□□ -1.55
CD40P25942 AC115286.1-201ENST00000604298 434 ntBASIC5.35□□□□□ -1.55
CD40P25942 NDUFA8P1-201ENST00000605525 367 ntBASIC5.35□□□□□ -1.55
CD40P25942 AC243773.3-201ENST00000613270 256 ntBASIC5.35□□□□□ -1.55
CD40P25942 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.35□□□□□ -1.55
CD40P25942 AC091932.2-201ENST00000623014 291 ntBASIC5.35□□□□□ -1.55
CD40P25942 AP000648.2-201ENST00000624182 404 ntBASIC5.35□□□□□ -1.55
CD40P25942 AC068137.3-201ENST00000639191 341 ntBASIC5.35□□□□□ -1.55
CD40P25942 AC073869.6-201ENST00000640656 341 ntBASIC5.35□□□□□ -1.55
CD40P25942 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CD40P25942 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.35□□□□□ -1.55
CD40P25942 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CD40P25942 AC096921.2-201ENST00000561507 1916 ntBASIC5.35□□□□□ -1.55
CD40P25942 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CD40P25942 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40P25942 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CD40P25942 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40P25942 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
CD40P25942 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40P25942 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.34□□□□□ -1.55
CD40P25942 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.34□□□□□ -1.55
CD40P25942 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 OR4A15-201ENST00000314706 1035 ntBASIC5.34□□□□□ -1.55
CD40P25942 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 Y_RNA.6-201ENST00000362350 114 ntBASIC5.34□□□□□ -1.55
CD40P25942 RNU6-462P-201ENST00000362659 105 ntBASIC5.34□□□□□ -1.55
CD40P25942 RNU5F-6P-201ENST00000362979 116 ntBASIC5.34□□□□□ -1.55
CD40P25942 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40P25942 LCN1P2-201ENST00000372030 223 ntBASIC5.34□□□□□ -1.55
CD40P25942 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 AL078604.1-201ENST00000404609 466 ntBASIC5.34□□□□□ -1.55
CD40P25942 RNU2-66P-201ENST00000410650 161 ntBASIC5.34□□□□□ -1.55
CD40P25942 FCF1P9-201ENST00000412546 282 ntBASIC5.34□□□□□ -1.55
CD40P25942 RPL21P108-201ENST00000413857 481 ntBASIC5.34□□□□□ -1.55
CD40P25942 HMGB1P11-201ENST00000413899 637 ntBASIC5.34□□□□□ -1.55
CD40P25942 RPL35AP31-201ENST00000418340 337 ntBASIC5.34□□□□□ -1.55
CD40P25942 AK4P4-201ENST00000419465 646 ntBASIC5.34□□□□□ -1.55
CD40P25942 AC083875.1-201ENST00000419509 405 ntBASIC5.34□□□□□ -1.55
CD40P25942 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.34□□□□□ -1.55
CD40P25942 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.34□□□□□ -1.55
CD40P25942 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 NME1P1-201ENST00000420914 382 ntBASIC5.34□□□□□ -1.55
CD40P25942 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.34□□□□□ -1.55
CD40P25942 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40P25942 AL158073.1-201ENST00000426848 1104 ntBASIC5.34□□□□□ -1.55
CD40P25942 ZYG11AP1-201ENST00000430329 837 ntBASIC5.34□□□□□ -1.55
CD40P25942 OR2B8P-201ENST00000432841 938 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms