Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.26□□□□□ -1.73
COL5A1P20908 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.26□□□□□ -1.73
COL5A1P20908 RPL36AP10-201ENST00000421785 322 ntBASIC4.26□□□□□ -1.73
COL5A1P20908 AL157831.1-201ENST00000426134 473 ntBASIC4.26□□□□□ -1.73
COL5A1P20908 YME1L1P1-201ENST00000429435 297 ntBASIC4.26□□□□□ -1.73
COL5A1P20908 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.26□□□□□ -1.73
COL5A1P20908 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.26□□□□□ -1.73
COL5A1P20908 AC006326.1-201ENST00000445465 787 ntBASIC4.26□□□□□ -1.73
COL5A1P20908 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.26□□□□□ -1.73
COL5A1P20908 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.26□□□□□ -1.73
COL5A1P20908 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.26□□□□□ -1.73
COL5A1P20908 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.26□□□□□ -1.73
COL5A1P20908 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.26□□□□□ -1.73
COL5A1P20908 AC012442.3-202ENST00000636742 206 ntBASIC4.26□□□□□ -1.73
COL5A1P20908 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
COL5A1P20908 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.26□□□□□ -1.73
COL5A1P20908 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 AL136164.3-201ENST00000624429 3978 ntBASIC4.26□□□□□ -1.73
COL5A1P20908 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
COL5A1P20908 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.25□□□□□ -1.73
COL5A1P20908 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
COL5A1P20908 RN7SKP167-201ENST00000411047 285 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.25□□□□□ -1.73
COL5A1P20908 AC114814.2-201ENST00000419195 485 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 RPL37P1-201ENST00000432310 284 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.25□□□□□ -1.73
COL5A1P20908 MRPL48P1-201ENST00000445390 636 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A1P20908 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.25□□□□□ -1.73
COL5A1P20908 AC012671.1-201ENST00000451912 203 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 AC091959.2-201ENST00000477363 321 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 RNA5SP73-201ENST00000516744 108 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.25□□□□□ -1.73
COL5A1P20908 CCNG2P1-201ENST00000549521 1000 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.25□□□□□ -1.73
COL5A1P20908 RN7SL600P-201ENST00000581811 299 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 AL354984.3-201ENST00000604803 325 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 RNU4-89P-201ENST00000607443 133 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 AL356121.2-201ENST00000624715 780 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A1P20908 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A1P20908 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
COL5A1P20908 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COL5A1P20908 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.25□□□□□ -1.73
COL5A1P20908 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.25□□□□□ -1.73
COL5A1P20908 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A1P20908 RNA5SP151-201ENST00000365632 117 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
COL5A1P20908 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A1P20908 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A1P20908 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.25□□□□□ -1.73
COL5A1P20908 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.25□□□□□ -1.73
COL5A1P20908 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.25□□□□□ -1.73
COL5A1P20908 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.25□□□□□ -1.73
COL5A1P20908 RPL23AP2-201ENST00000471227 466 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
COL5A1P20908 AL132838.2-201ENST00000492041 314 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.25□□□□□ -1.73
COL5A1P20908 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.25□□□□□ -1.73
COL5A1P20908 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.25□□□□□ -1.73
COL5A1P20908 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.25□□□□□ -1.73
COL5A1P20908 LSM3P2-201ENST00000551246 273 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.25□□□□□ -1.73
COL5A1P20908 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.25□□□□□ -1.73
COL5A1P20908 AC010487.1-201ENST00000594408 1172 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 AL049840.6-202ENST00000603373 279 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 AC063952.1-203ENST00000634410 658 ntBASIC4.25□□□□□ -1.73
COL5A1P20908 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A1P20908 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL5A1P20908 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL5A1P20908 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A1P20908 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A1P20908 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A1P20908 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A1P20908 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A1P20908 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A1P20908 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
COL5A1P20908 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.24□□□□□ -1.73
COL5A1P20908 SNORA74C-2-201ENST00000411179 201 ntBASIC4.24□□□□□ -1.73
COL5A1P20908 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.24□□□□□ -1.73
COL5A1P20908 CRYBB2P1-203ENST00000415709 538 ntBASIC4.24□□□□□ -1.73
COL5A1P20908 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.24□□□□□ -1.73
COL5A1P20908 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.24□□□□□ -1.73
COL5A1P20908 RPL23AP37-201ENST00000479658 549 ntBASIC4.24□□□□□ -1.73
COL5A1P20908 RN7SL812P-201ENST00000493791 279 ntBASIC4.24□□□□□ -1.73
COL5A1P20908 AC068993.1-201ENST00000546724 589 ntBASIC4.24□□□□□ -1.73
COL5A1P20908 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.24□□□□□ -1.73
COL5A1P20908 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.24□□□□□ -1.73
COL5A1P20908 FAM27D1-201ENST00000612308 341 ntBASIC4.24□□□□□ -1.73
COL5A1P20908 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.24□□□□□ -1.73
COL5A1P20908 CDRT1-208ENST00000630868 794 ntBASIC4.24□□□□□ -1.73
COL5A1P20908 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms