Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MIR6780B-201ENST00000610307 79 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 AC005840.5-201ENST00000619166 599 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.86□□□□□ -1.47
COL6A2P12110 AP005432.1-201ENST00000580891 3485 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL6A2P12110 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.86□□□□□ -1.47
COL6A2P12110 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL6A2P12110 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL6A2P12110 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL6A2P12110 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL6A2P12110 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
COL6A2P12110 AC138907.8-201ENST00000623981 2256 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 AL034546.1-201ENST00000623740 3693 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL6A2P12110 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.86□□□□□ -1.47
COL6A2P12110 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.85□□□□□ -1.47
COL6A2P12110 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.85□□□□□ -1.47
COL6A2P12110 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 AC011447.7-201ENST00000624228 1590 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL6A2P12110 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.85□□□□□ -1.47
COL6A2P12110 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 AC004656.1-201ENST00000568479 4951 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 RNA5SP453-201ENST00000362503 119 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 SNORA4.1-201ENST00000364263 144 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 SNORA62.2-201ENST00000364672 152 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 Y_RNA.516-201ENST00000384541 124 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AC136624.1-201ENST00000400791 413 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AL132875.1-201ENST00000403623 949 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL6A2P12110 RN7SKP146-201ENST00000410242 334 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 RN7SKP108-201ENST00000411367 328 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 VN1R20P-201ENST00000425215 966 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A2P12110 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.85□□□□□ -1.47
COL6A2P12110 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A2P12110 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 AC241584.1-201ENST00000438469 1241 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 RPS7P3-201ENST00000443360 580 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A2P12110 USP9YP29-201ENST00000445112 563 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A2P12110 AL034418.1-201ENST00000448675 860 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 COX6CP18-201ENST00000448769 222 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 RPL36AP33-201ENST00000450395 310 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 AC099670.1-201ENST00000455141 783 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 RPL12P39-201ENST00000455456 496 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A2P12110 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.85□□□□□ -1.47
COL6A2P12110 AC104685.1-201ENST00000502445 371 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A2P12110 ZNF519P4-201ENST00000514008 125 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 RNU6-405P-201ENST00000516637 110 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 NRON-201ENST00000517270 370 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 DUXAP2-201ENST00000519198 589 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.85□□□□□ -1.47
COL6A2P12110 OR7K1P-201ENST00000546439 926 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.85□□□□□ -1.47
COL6A2P12110 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 GTF2IP8-201ENST00000560687 584 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A2P12110 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 AC087481.2-201ENST00000565492 330 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A2P12110 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A2P12110 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A2P12110 AP005262.1-201ENST00000582646 997 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.85□□□□□ -1.47
COL6A2P12110 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.85□□□□□ -1.47
COL6A2P12110 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A2P12110 MTCYBP22-201ENST00000603788 447 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AC133552.5-201ENST00000604266 540 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AL513477.2-201ENST00000607858 568 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 Z99129.1-201ENST00000612510 255 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 AC022400.9-201ENST00000623633 273 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 AC145207.9-201ENST00000623802 325 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms