Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MAPK10-286ENST00000641208 8747 ntBASIC7.44□□□□□ -1.22
TOP2AP11388 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
TOP2AP11388 AC092162.3-201ENST00000624511 1624 ntBASIC7.44□□□□□ -1.22
TOP2AP11388 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC7.44□□□□□ -1.22
TOP2AP11388 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
TOP2AP11388 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC7.44□□□□□ -1.22
TOP2AP11388 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC7.43□□□□□ -1.22
TOP2AP11388 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TOP2AP11388 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
TOP2AP11388 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TOP2AP11388 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.43□□□□□ -1.22
TOP2AP11388 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
TOP2AP11388 AL022393.1-201ENST00000625142 1677 ntBASIC7.43□□□□□ -1.22
TOP2AP11388 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC7.43□□□□□ -1.22
TOP2AP11388 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
TOP2AP11388 AC069157.1-201ENST00000421749 137 ntBASIC7.43□□□□□ -1.22
TOP2AP11388 GCA-203ENST00000429691 824 ntTSL 3 BASIC7.43□□□□□ -1.22
TOP2AP11388 TBCAP1-201ENST00000436520 327 ntBASIC7.43□□□□□ -1.22
TOP2AP11388 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC7.43□□□□□ -1.22
TOP2AP11388 AL353726.1-201ENST00000614041 1000 ntBASIC7.43□□□□□ -1.22
TOP2AP11388 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.43□□□□□ -1.22
TOP2AP11388 AC091905.2-201ENST00000623143 306 ntBASIC7.43□□□□□ -1.22
TOP2AP11388 AC004777.1-201ENST00000624317 287 ntBASIC7.43□□□□□ -1.22
TOP2AP11388 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TOP2AP11388 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TOP2AP11388 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TOP2AP11388 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC7.43□□□□□ -1.22
TOP2AP11388 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TOP2AP11388 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.43□□□□□ -1.22
TOP2AP11388 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TOP2AP11388 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TOP2AP11388 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TOP2AP11388 AL035246.1-201ENST00000433554 1255 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 PTMAP3-201ENST00000447474 330 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 ATP5G1P3-201ENST00000463301 410 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 GTF2IP22-201ENST00000554443 182 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 AC090912.3-201ENST00000609775 533 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 EIF3EP2-201ENST00000423042 1814 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TOP2AP11388 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TOP2AP11388 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TOP2AP11388 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
TOP2AP11388 SNORA63.1-201ENST00000362493 131 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 5S_rRNA.1-201ENST00000364415 116 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 MIR1911-201ENST00000410783 80 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 VTI1BP4-201ENST00000427516 527 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 CEACAMP1-201ENST00000434624 1035 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC7.42□□□□□ -1.22
TOP2AP11388 AC108751.2-201ENST00000469993 231 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.42□□□□□ -1.22
TOP2AP11388 MTND4LP31-201ENST00000514859 294 ntBASIC7.42□□□□□ -1.22
TOP2AP11388 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC7.42□□□□□ -1.22
TOP2AP11388 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC7.42□□□□□ -1.22
TOP2AP11388 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.42□□□□□ -1.22
TOP2AP11388 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
TOP2AP11388 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC7.42□□□□□ -1.22
TOP2AP11388 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
TOP2AP11388 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
TOP2AP11388 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
TOP2AP11388 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TOP2AP11388 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC7.41□□□□□ -1.22
TOP2AP11388 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
TOP2AP11388 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
TOP2AP11388 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC7.41□□□□□ -1.22
TOP2AP11388 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.41□□□□□ -1.22
TOP2AP11388 RNU4-6P-201ENST00000410804 122 ntBASIC7.41□□□□□ -1.22
TOP2AP11388 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC7.41□□□□□ -1.22
TOP2AP11388 AC022336.1-201ENST00000475510 337 ntBASIC7.41□□□□□ -1.22
TOP2AP11388 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC7.41□□□□□ -1.22
TOP2AP11388 RNU6-352P-201ENST00000516908 107 ntBASIC7.41□□□□□ -1.22
TOP2AP11388 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.41□□□□□ -1.22
TOP2AP11388 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.41□□□□□ -1.22
TOP2AP11388 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC7.41□□□□□ -1.22
TOP2AP11388 AC120057.2-201ENST00000571520 271 ntBASIC7.41□□□□□ -1.22
TOP2AP11388 MIR5684-201ENST00000585074 65 ntBASIC7.41□□□□□ -1.22
TOP2AP11388 AL121772.2-201ENST00000614331 297 ntBASIC7.41□□□□□ -1.22
TOP2AP11388 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.41□□□□□ -1.22
TOP2AP11388 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC7.41□□□□□ -1.22
TOP2AP11388 TEX41-300ENST00000631048 69 ntTSL 5 BASIC7.41□□□□□ -1.22
TOP2AP11388 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
TOP2AP11388 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TOP2AP11388 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TOP2AP11388 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TOP2AP11388 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
TOP2AP11388 VPS35P1-201ENST00000563400 1518 ntBASIC7.4□□□□□ -1.22
TOP2AP11388 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TOP2AP11388 RNU1-44P-201ENST00000384453 163 ntBASIC7.4□□□□□ -1.22
TOP2AP11388 MIR1179-201ENST00000408703 91 ntBASIC7.4□□□□□ -1.22
TOP2AP11388 NOTCH2P1-201ENST00000443481 624 ntBASIC7.4□□□□□ -1.22
TOP2AP11388 RPL7P22-201ENST00000466005 733 ntBASIC7.4□□□□□ -1.22
TOP2AP11388 TRMT10BP1-201ENST00000519377 943 ntBASIC7.4□□□□□ -1.22
TOP2AP11388 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC7.4□□□□□ -1.22
TOP2AP11388 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC7.4□□□□□ -1.22
TOP2AP11388 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
TOP2AP11388 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.4□□□□□ -1.22
TOP2AP11388 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC7.4□□□□□ -1.22
TOP2AP11388 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.4□□□□□ -1.22
TOP2AP11388 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
TOP2AP11388 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.4□□□□□ -1.23
TOP2AP11388 SUPT16HP1-201ENST00000537175 3133 ntBASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms