Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TOP1P11387 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.34□□□□□ -1.55
TOP1P11387 MTND2P28-201ENST00000457540 1044 ntBASIC5.34□□□□□ -1.55
TOP1P11387 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TOP1P11387 RPL23AP37-201ENST00000479658 549 ntBASIC5.34□□□□□ -1.55
TOP1P11387 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TOP1P11387 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.34□□□□□ -1.55
TOP1P11387 TCP11X3P-202ENST00000514289 1254 ntBASIC5.34□□□□□ -1.55
TOP1P11387 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.34□□□□□ -1.55
TOP1P11387 NPM1P52-201ENST00000518264 846 ntBASIC5.34□□□□□ -1.55
TOP1P11387 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.34□□□□□ -1.55
TOP1P11387 AP000827.1-201ENST00000527814 258 ntBASIC5.34□□□□□ -1.55
TOP1P11387 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.34□□□□□ -1.55
TOP1P11387 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.34□□□□□ -1.55
TOP1P11387 AP005019.3-201ENST00000620418 560 ntBASIC5.34□□□□□ -1.55
TOP1P11387 AC002044.3-201ENST00000623314 541 ntBASIC5.34□□□□□ -1.55
TOP1P11387 MAPK10-303ENST00000641324 3959 ntBASIC5.34□□□□□ -1.56
TOP1P11387 AL355852.1-201ENST00000454081 1771 ntBASIC5.34□□□□□ -1.56
TOP1P11387 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TOP1P11387 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
TOP1P11387 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TOP1P11387 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.33□□□□□ -1.56
TOP1P11387 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TOP1P11387 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.33□□□□□ -1.56
TOP1P11387 AP001273.1-201ENST00000624493 3152 ntBASIC5.33□□□□□ -1.56
TOP1P11387 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.33□□□□□ -1.56
TOP1P11387 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.33□□□□□ -1.56
TOP1P11387 OR56B2P-201ENST00000317102 954 ntBASIC5.33□□□□□ -1.56
TOP1P11387 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.33□□□□□ -1.56
TOP1P11387 MT-RNR1-201ENST00000389680 954 ntBASIC5.33□□□□□ -1.56
TOP1P11387 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.33□□□□□ -1.56
TOP1P11387 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.33□□□□□ -1.56
TOP1P11387 AC010740.1-201ENST00000417035 684 ntBASIC5.33□□□□□ -1.56
TOP1P11387 RPL7AP25-201ENST00000423357 805 ntBASIC5.33□□□□□ -1.56
TOP1P11387 AP000936.3-201ENST00000438127 255 ntBASIC5.33□□□□□ -1.56
TOP1P11387 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.33□□□□□ -1.56
TOP1P11387 RN7SL809P-201ENST00000482040 297 ntBASIC5.33□□□□□ -1.56
TOP1P11387 CEACAMP10-202ENST00000495431 496 ntBASIC5.33□□□□□ -1.56
TOP1P11387 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
TOP1P11387 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.33□□□□□ -1.56
TOP1P11387 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.33□□□□□ -1.56
TOP1P11387 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.33□□□□□ -1.56
TOP1P11387 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.33□□□□□ -1.56
TOP1P11387 AC005520.3-201ENST00000602874 370 ntBASIC5.33□□□□□ -1.56
TOP1P11387 RPL26P30-202ENST00000602923 645 ntBASIC5.33□□□□□ -1.56
TOP1P11387 AC004241.3-201ENST00000611728 517 ntBASIC5.33□□□□□ -1.56
TOP1P11387 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.33□□□□□ -1.56
TOP1P11387 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
TOP1P11387 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TOP1P11387 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TOP1P11387 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.32□□□□□ -1.56
TOP1P11387 AC139713.2-214ENST00000642059 1811 ntBASIC5.32□□□□□ -1.56
TOP1P11387 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.32□□□□□ -1.56
TOP1P11387 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TOP1P11387 AC233968.1-201ENST00000611212 1300 ntBASIC5.32□□□□□ -1.56
TOP1P11387 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TOP1P11387 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TOP1P11387 RNA5SP447-201ENST00000363749 119 ntBASIC5.32□□□□□ -1.56
TOP1P11387 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.32□□□□□ -1.56
TOP1P11387 RPL21P43-201ENST00000425440 472 ntBASIC5.32□□□□□ -1.56
TOP1P11387 AP001324.1-201ENST00000428553 399 ntBASIC5.32□□□□□ -1.56
TOP1P11387 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.32□□□□□ -1.56
TOP1P11387 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.32□□□□□ -1.56
TOP1P11387 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.32□□□□□ -1.56
TOP1P11387 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.32□□□□□ -1.56
TOP1P11387 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.32□□□□□ -1.56
TOP1P11387 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
TOP1P11387 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.32□□□□□ -1.56
TOP1P11387 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TOP1P11387 snoU109.6-201ENST00000516831 118 ntBASIC5.32□□□□□ -1.56
TOP1P11387 AC034205.1-201ENST00000520621 638 ntBASIC5.32□□□□□ -1.56
TOP1P11387 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.32□□□□□ -1.56
TOP1P11387 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TOP1P11387 COX6CP4-201ENST00000605798 228 ntBASIC5.32□□□□□ -1.56
TOP1P11387 AL023583.1-201ENST00000607518 1143 ntBASIC5.32□□□□□ -1.56
TOP1P11387 AC012409.3-201ENST00000611343 981 ntBASIC5.32□□□□□ -1.56
TOP1P11387 AC005086.4-201ENST00000623065 213 ntBASIC5.32□□□□□ -1.56
TOP1P11387 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.32□□□□□ -1.56
TOP1P11387 DDX18P4-201ENST00000511690 1966 ntBASIC5.32□□□□□ -1.56
TOP1P11387 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TOP1P11387 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TOP1P11387 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.32□□□□□ -1.56
TOP1P11387 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TOP1P11387 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
TOP1P11387 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
TOP1P11387 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TOP1P11387 MAPK10-349ENST00000641767 3661 ntBASIC5.32□□□□□ -1.56
TOP1P11387 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TOP1P11387 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TOP1P11387 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TOP1P11387 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.31□□□□□ -1.56
TOP1P11387 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TOP1P11387 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
TOP1P11387 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.31□□□□□ -1.56
TOP1P11387 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TOP1P11387 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TOP1P11387 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TOP1P11387 U3.22-201ENST00000391120 215 ntBASIC5.31□□□□□ -1.56
TOP1P11387 RNA5SP105-201ENST00000391123 113 ntBASIC5.31□□□□□ -1.56
TOP1P11387 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms