Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL590392.1-201ENST00000604960 446 ntBASIC3.63□□□□□ -1.83
CD28P10747 AL592494.3-201ENST00000609485 464 ntBASIC3.63□□□□□ -1.83
CD28P10747 AC015922.4-201ENST00000612568 690 ntBASIC3.63□□□□□ -1.83
CD28P10747 AL121890.2-201ENST00000617644 465 ntBASIC3.63□□□□□ -1.83
CD28P10747 AP005019.3-201ENST00000620418 560 ntBASIC3.63□□□□□ -1.83
CD28P10747 AC015871.5-202ENST00000623252 701 ntBASIC3.63□□□□□ -1.83
CD28P10747 OR52H1-202ENST00000641796 1061 ntBASIC3.63□□□□□ -1.83
CD28P10747 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.63□□□□□ -1.83
CD28P10747 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD28P10747 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD28P10747 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.63□□□□□ -1.83
CD28P10747 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD28P10747 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CD28P10747 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CD28P10747 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD28P10747 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CD28P10747 OR14L1P-202ENST00000641545 3009 ntBASIC3.62□□□□□ -1.83
CD28P10747 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CD28P10747 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CD28P10747 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CD28P10747 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CD28P10747 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.62□□□□□ -1.83
CD28P10747 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 RAD17P1-201ENST00000418130 2042 ntBASIC3.62□□□□□ -1.83
CD28P10747 RNU4-44P-201ENST00000363050 141 ntBASIC3.62□□□□□ -1.83
CD28P10747 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.62□□□□□ -1.83
CD28P10747 AL590762.2-201ENST00000395798 571 ntBASIC3.62□□□□□ -1.83
CD28P10747 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.62□□□□□ -1.83
CD28P10747 CASKP1-201ENST00000412870 582 ntBASIC3.62□□□□□ -1.83
CD28P10747 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 GLUD1P9-201ENST00000420997 1173 ntBASIC3.62□□□□□ -1.83
CD28P10747 RSL24D1P6-201ENST00000426934 401 ntBASIC3.62□□□□□ -1.83
CD28P10747 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.62□□□□□ -1.83
CD28P10747 CBX1P1-201ENST00000440184 427 ntBASIC3.62□□□□□ -1.83
CD28P10747 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.62□□□□□ -1.83
CD28P10747 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CD28P10747 AC108463.1-201ENST00000450258 347 ntBASIC3.62□□□□□ -1.83
CD28P10747 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.62□□□□□ -1.83
CD28P10747 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 AC090142.1-201ENST00000465776 462 ntBASIC3.62□□□□□ -1.83
CD28P10747 RPL21P126-201ENST00000470049 478 ntBASIC3.62□□□□□ -1.83
CD28P10747 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.62□□□□□ -1.83
CD28P10747 AC022336.1-201ENST00000475510 337 ntBASIC3.62□□□□□ -1.83
CD28P10747 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.62□□□□□ -1.83
CD28P10747 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.62□□□□□ -1.83
CD28P10747 AC138938.1-201ENST00000515431 782 ntBASIC3.62□□□□□ -1.83
CD28P10747 RN7SKP122-201ENST00000515923 296 ntBASIC3.62□□□□□ -1.83
CD28P10747 IGLVIV-65-201ENST00000517313 360 ntBASIC3.62□□□□□ -1.83
CD28P10747 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.62□□□□□ -1.83
CD28P10747 AC105129.1-201ENST00000560250 297 ntBASIC3.62□□□□□ -1.83
CD28P10747 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 MIR4675-201ENST00000577898 77 ntBASIC3.62□□□□□ -1.83
CD28P10747 SNORD39.2-201ENST00000579995 76 ntBASIC3.62□□□□□ -1.83
CD28P10747 AC023575.1-201ENST00000580510 358 ntBASIC3.62□□□□□ -1.83
CD28P10747 KPNA2P3-201ENST00000584190 848 ntBASIC3.62□□□□□ -1.83
CD28P10747 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.62□□□□□ -1.83
CD28P10747 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 AC124856.1-201ENST00000600819 896 ntBASIC3.62□□□□□ -1.83
CD28P10747 AC008782.1-201ENST00000603386 430 ntBASIC3.62□□□□□ -1.83
CD28P10747 AC005191.1-201ENST00000603950 358 ntBASIC3.62□□□□□ -1.83
CD28P10747 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CD28P10747 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.62□□□□□ -1.83
CD28P10747 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.62□□□□□ -1.83
CD28P10747 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CD28P10747 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CD28P10747 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 ANAPC1P1-201ENST00000426186 2145 ntBASIC3.62□□□□□ -1.83
CD28P10747 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CD28P10747 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CD28P10747 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CD28P10747 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.62□□□□□ -1.83
CD28P10747 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CD28P10747 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CD28P10747 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CD28P10747 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.61□□□□□ -1.83
CD28P10747 AC025031.4-201ENST00000621248 3271 ntBASIC3.61□□□□□ -1.83
CD28P10747 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.61□□□□□ -1.83
CD28P10747 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CD28P10747 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CD28P10747 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CD28P10747 BMS1P3-201ENST00000372011 932 ntBASIC3.61□□□□□ -1.83
CD28P10747 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.61□□□□□ -1.83
CD28P10747 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.61□□□□□ -1.83
CD28P10747 RPL7AP25-201ENST00000423357 805 ntBASIC3.61□□□□□ -1.83
CD28P10747 RGS17P1-201ENST00000423358 553 ntBASIC3.61□□□□□ -1.83
CD28P10747 AC234779.1-201ENST00000425910 285 ntBASIC3.61□□□□□ -1.83
CD28P10747 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.61□□□□□ -1.83
CD28P10747 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.61□□□□□ -1.83
CD28P10747 HSPE1P22-201ENST00000456856 327 ntBASIC3.61□□□□□ -1.83
CD28P10747 CYCSP34-201ENST00000458172 304 ntBASIC3.61□□□□□ -1.83
CD28P10747 AP000942.1-201ENST00000463969 747 ntBASIC3.61□□□□□ -1.83
CD28P10747 AC011276.1-201ENST00000469688 323 ntBASIC3.61□□□□□ -1.83
CD28P10747 AC109327.1-201ENST00000471666 403 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms