Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
COL3A1P02461 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
COL3A1P02461 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.98□□□□□ -1.45
COL3A1P02461 IGKV7-3-201ENST00000357453 298 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL3A1P02461 HNRNPDP2-201ENST00000406475 478 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 MTND2P16-201ENST00000419987 799 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.98□□□□□ -1.45
COL3A1P02461 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.98□□□□□ -1.45
COL3A1P02461 XKRYP6-201ENST00000440468 1116 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 XKRYP3-201ENST00000442113 1116 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 MTCYBP21-201ENST00000443300 1113 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.98□□□□□ -1.45
COL3A1P02461 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL3A1P02461 Z77249.1-201ENST00000444622 1175 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.98□□□□□ -1.45
COL3A1P02461 AC092685.1-201ENST00000447960 1243 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.98□□□□□ -1.45
COL3A1P02461 RN7SL98P-201ENST00000462271 300 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.98□□□□□ -1.45
COL3A1P02461 MTND3P24-201ENST00000506306 329 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 AC118465.1-201ENST00000513820 1271 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 AC117525.1-201ENST00000515228 503 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.98□□□□□ -1.45
COL3A1P02461 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.98□□□□□ -1.45
COL3A1P02461 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.98□□□□□ -1.45
COL3A1P02461 ATP5J2P6-201ENST00000565203 266 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 AC069366.1-201ENST00000583159 838 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.98□□□□□ -1.45
COL3A1P02461 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
COL3A1P02461 SCARNA15-201ENST00000607520 4325 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL3A1P02461 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL3A1P02461 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL3A1P02461 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.98□□□□□ -1.45
COL3A1P02461 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL3A1P02461 AC108467.2-201ENST00000617640 1597 ntBASIC5.98□□□□□ -1.45
COL3A1P02461 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.98□□□□□ -1.45
COL3A1P02461 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.98□□□□□ -1.45
COL3A1P02461 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL3A1P02461 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.98□□□□□ -1.45
COL3A1P02461 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.97□□□□□ -1.45
COL3A1P02461 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.97□□□□□ -1.45
COL3A1P02461 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL3A1P02461 AC097063.1-201ENST00000426714 1797 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL3A1P02461 FAR1P1-201ENST00000427163 934 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.97□□□□□ -1.45
COL3A1P02461 Z95152.1-201ENST00000453556 656 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 AC068587.1-201ENST00000483613 781 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 RN7SL691P-201ENST00000494487 301 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 RN7SKP122-201ENST00000515923 296 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 AC023538.1-201ENST00000534576 736 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 AC013444.2-201ENST00000603317 787 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 AL445423.1-201ENST00000609941 536 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 U6.48-201ENST00000618523 106 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 AC019226.2-201ENST00000625973 424 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 OR52H1-202ENST00000641796 1061 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 AC108751.5-201ENST00000492880 1336 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
COL3A1P02461 AC083837.1-201ENST00000565297 2994 ntBASIC5.97□□□□□ -1.45
COL3A1P02461 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL3A1P02461 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
COL3A1P02461 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
COL3A1P02461 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.97□□□□□ -1.45
COL3A1P02461 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.97□□□□□ -1.45
COL3A1P02461 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
COL3A1P02461 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.97□□□□□ -1.45
COL3A1P02461 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL3A1P02461 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
COL3A1P02461 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.96□□□□□ -1.45
COL3A1P02461 MTCO2P1-201ENST00000424648 477 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 AC092634.2-201ENST00000428146 1010 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 CDY14P-201ENST00000431260 1014 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 ZFAND6P1-201ENST00000434138 605 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 CDY12P-201ENST00000440679 1015 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 CDY13P-201ENST00000445813 1015 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.96□□□□□ -1.45
COL3A1P02461 CDY23P-201ENST00000451661 1014 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 MTND2P28-201ENST00000457540 1044 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 NDUFA5P9-201ENST00000472609 340 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.96□□□□□ -1.45
COL3A1P02461 AC015795.1-201ENST00000513669 327 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.96□□□□□ -1.45
COL3A1P02461 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.96□□□□□ -1.45
COL3A1P02461 CD24P2-201ENST00000565486 219 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 AL445435.1-201ENST00000604232 665 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 AC006065.6-201ENST00000625201 545 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.96□□□□□ -1.45
COL3A1P02461 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL3A1P02461 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.45
COL3A1P02461 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
COL3A1P02461 AL133268.1-201ENST00000405676 1401 ntBASIC5.96□□□□□ -1.45
COL3A1P02461 AC090017.1-201ENST00000548612 1779 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL3A1P02461 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL3A1P02461 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.96□□□□□ -1.46
COL3A1P02461 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.96□□□□□ -1.46
COL3A1P02461 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms