Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIR3936-201ENST00000584304 110 ntBASIC5.26□□□□□ -1.57
COL1A1P02452 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.26□□□□□ -1.57
COL1A1P02452 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
COL1A1P02452 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.26□□□□□ -1.57
COL1A1P02452 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
COL1A1P02452 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.26□□□□□ -1.57
COL1A1P02452 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 AL133268.1-201ENST00000405676 1401 ntBASIC5.26□□□□□ -1.57
COL1A1P02452 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
COL1A1P02452 RNA5SP307-201ENST00000362863 116 ntBASIC5.26□□□□□ -1.57
COL1A1P02452 RN7SKP235-201ENST00000410662 305 ntBASIC5.26□□□□□ -1.57
COL1A1P02452 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.26□□□□□ -1.57
COL1A1P02452 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.26□□□□□ -1.57
COL1A1P02452 TPT1P1-201ENST00000458495 518 ntBASIC5.26□□□□□ -1.57
COL1A1P02452 ATP5G1P3-201ENST00000463301 410 ntBASIC5.26□□□□□ -1.57
COL1A1P02452 TPT1P3-201ENST00000492841 512 ntBASIC5.26□□□□□ -1.57
COL1A1P02452 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.26□□□□□ -1.57
COL1A1P02452 RPL7P50-201ENST00000600588 727 ntBASIC5.26□□□□□ -1.57
COL1A1P02452 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.26□□□□□ -1.57
COL1A1P02452 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL1A1P02452 MAPK10-286ENST00000641208 8747 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL1A1P02452 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL1A1P02452 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL1A1P02452 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
COL1A1P02452 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.25□□□□□ -1.57
COL1A1P02452 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL1A1P02452 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL1A1P02452 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
COL1A1P02452 AC107068.1-201ENST00000563286 4218 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL1A1P02452 MIR372-201ENST00000362225 67 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 RNU1-14P-201ENST00000362759 152 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 SNORA70.4-201ENST00000365509 134 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL1A1P02452 MIR554-201ENST00000384874 96 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 SNORD96B-201ENST00000386148 79 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 MT-RNR1-201ENST00000389680 954 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.25□□□□□ -1.57
COL1A1P02452 RNA5SP36-201ENST00000410197 133 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 RNA5SP44-201ENST00000410446 133 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 RN7SKP33-201ENST00000410942 340 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL1A1P02452 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.25□□□□□ -1.57
COL1A1P02452 AC079804.1-201ENST00000461922 436 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 RN7SL542P-201ENST00000467147 294 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 RPL35AP15-201ENST00000468042 339 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.25□□□□□ -1.57
COL1A1P02452 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.25□□□□□ -1.57
COL1A1P02452 ATP1B1P1-201ENST00000509767 915 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.25□□□□□ -1.57
COL1A1P02452 RNA5SP497-201ENST00000516081 97 ntBASIC5.25□□□□□ -1.57
COL1A1P02452 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.25□□□□□ -1.57
COL1A1P02452 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.25□□□□□ -1.57
COL1A1P02452 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.25□□□□□ -1.57
COL1A1P02452 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL1A1P02452 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL1A1P02452 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.24□□□□□ -1.57
COL1A1P02452 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL1A1P02452 MAPK10-349ENST00000641767 3661 ntBASIC5.24□□□□□ -1.57
COL1A1P02452 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL1A1P02452 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL1A1P02452 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL1A1P02452 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL1A1P02452 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL1A1P02452 RNA5SP171-201ENST00000391071 115 ntBASIC5.24□□□□□ -1.57
COL1A1P02452 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.24□□□□□ -1.57
COL1A1P02452 AC062016.2-201ENST00000420950 676 ntBASIC5.24□□□□□ -1.57
COL1A1P02452 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL1A1P02452 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL1A1P02452 AC006326.1-201ENST00000445465 787 ntBASIC5.24□□□□□ -1.57
COL1A1P02452 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.24□□□□□ -1.57
COL1A1P02452 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.24□□□□□ -1.57
COL1A1P02452 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.24□□□□□ -1.57
COL1A1P02452 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.24□□□□□ -1.57
COL1A1P02452 AL592156.1-201ENST00000508758 304 ntBASIC5.24□□□□□ -1.57
COL1A1P02452 AGGF1P6-201ENST00000569213 976 ntBASIC5.24□□□□□ -1.57
COL1A1P02452 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.24□□□□□ -1.57
COL1A1P02452 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.24□□□□□ -1.57
COL1A1P02452 RN7SL703P-201ENST00000578485 302 ntBASIC5.24□□□□□ -1.57
COL1A1P02452 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL1A1P02452 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
COL1A1P02452 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL1A1P02452 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL1A1P02452 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COL1A1P02452 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL1A1P02452 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL1A1P02452 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL1A1P02452 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL1A1P02452 CASC19-204ENST00000641001 2055 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms