Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN2BO60939 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCN2BO60939 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN2BO60939 AC009313.2-201ENST00000417893 1941 ntBASIC4.33□□□□□ -1.72
SCN2BO60939 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SCN2BO60939 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN2BO60939 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN2BO60939 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN2BO60939 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN2BO60939 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN2BO60939 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCN2BO60939 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN2BO60939 RN7SKP149-201ENST00000363008 344 ntBASIC4.32□□□□□ -1.72
SCN2BO60939 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN2BO60939 RNU6-167P-201ENST00000384292 106 ntBASIC4.32□□□□□ -1.72
SCN2BO60939 AL121834.1-202ENST00000404494 277 ntBASIC4.32□□□□□ -1.72
SCN2BO60939 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN2BO60939 RAD23BP1-201ENST00000421404 1227 ntBASIC4.32□□□□□ -1.72
SCN2BO60939 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN2BO60939 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN2BO60939 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCN2BO60939 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCN2BO60939 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN2BO60939 EIF2S2P5-201ENST00000457635 968 ntBASIC4.32□□□□□ -1.72
SCN2BO60939 AC008897.1-201ENST00000494006 347 ntBASIC4.32□□□□□ -1.72
SCN2BO60939 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN2BO60939 AC007016.1-201ENST00000512110 244 ntBASIC4.32□□□□□ -1.72
SCN2BO60939 RNU2-30P-201ENST00000516209 141 ntBASIC4.32□□□□□ -1.72
SCN2BO60939 RN7SKP276-201ENST00000516242 268 ntBASIC4.32□□□□□ -1.72
SCN2BO60939 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN2BO60939 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.32□□□□□ -1.72
SCN2BO60939 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN2BO60939 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.32□□□□□ -1.72
SCN2BO60939 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.32□□□□□ -1.72
SCN2BO60939 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN2BO60939 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN2BO60939 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN2BO60939 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.32□□□□□ -1.72
SCN2BO60939 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SCN2BO60939 OR1F2P-201ENST00000570470 933 ntBASIC4.32□□□□□ -1.72
SCN2BO60939 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.32□□□□□ -1.72
SCN2BO60939 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN2BO60939 MIR7155-201ENST00000615925 56 ntBASIC4.32□□□□□ -1.72
SCN2BO60939 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SCN2BO60939 MIR6719-201ENST00000622428 87 ntBASIC4.32□□□□□ -1.72
SCN2BO60939 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN2BO60939 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN2BO60939 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN2BO60939 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SCN2BO60939 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN2BO60939 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN2BO60939 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN2BO60939 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SCN2BO60939 AC017104.4-201ENST00000636283 1592 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN2BO60939 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
SCN2BO60939 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.31□□□□□ -1.72
SCN2BO60939 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN2BO60939 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCN2BO60939 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.31□□□□□ -1.72
SCN2BO60939 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN2BO60939 AC125257.1-201ENST00000560400 2930 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN2BO60939 LAP3P1-201ENST00000403648 294 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN2BO60939 BX510359.2-201ENST00000417920 305 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 GAPDHP49-201ENST00000421421 961 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 CDY14P-201ENST00000431260 1014 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN2BO60939 CDY12P-201ENST00000440679 1015 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 CDY13P-201ENST00000445813 1015 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN2BO60939 AL162388.1-201ENST00000450912 352 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 CDY23P-201ENST00000451661 1014 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.31□□□□□ -1.72
SCN2BO60939 AC063943.1-201ENST00000465434 453 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 NDUFB5P1-201ENST00000508134 564 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.31□□□□□ -1.72
SCN2BO60939 SOX5P1-201ENST00000524155 1127 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SCN2BO60939 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.31□□□□□ -1.72
SCN2BO60939 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN2BO60939 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN2BO60939 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.31□□□□□ -1.72
SCN2BO60939 AC133644.2-201ENST00000608142 540 ntBASIC4.31□□□□□ -1.72
SCN2BO60939 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.31□□□□□ -1.72
SCN2BO60939 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.31□□□□□ -1.72
SCN2BO60939 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCN2BO60939 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.31□□□□□ -1.72
SCN2BO60939 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.31□□□□□ -1.72
SCN2BO60939 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCN2BO60939 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCN2BO60939 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN2BO60939 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.31□□□□□ -1.72
SCN2BO60939 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN2BO60939 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCN2BO60939 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN2BO60939 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SCN2BO60939 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SCN2BO60939 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms