Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX3O60493 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX3O60493 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.62□□□□□ -1.67
SNX3O60493 MTND2P39-201ENST00000457230 764 ntBASIC4.62□□□□□ -1.67
SNX3O60493 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX3O60493 RPS26P3-201ENST00000470205 348 ntBASIC4.62□□□□□ -1.67
SNX3O60493 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX3O60493 AC090543.2-201ENST00000483963 348 ntBASIC4.62□□□□□ -1.67
SNX3O60493 AC004057.1-201ENST00000485827 348 ntBASIC4.62□□□□□ -1.67
SNX3O60493 AC092902.1-201ENST00000486999 259 ntBASIC4.62□□□□□ -1.67
SNX3O60493 AC104629.1-201ENST00000494226 508 ntBASIC4.62□□□□□ -1.67
SNX3O60493 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX3O60493 RPS27AP18-201ENST00000515536 459 ntBASIC4.62□□□□□ -1.67
SNX3O60493 RN7SKP141-201ENST00000516167 338 ntBASIC4.62□□□□□ -1.67
SNX3O60493 SNORA31.13-201ENST00000516624 135 ntBASIC4.62□□□□□ -1.67
SNX3O60493 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX3O60493 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX3O60493 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.62□□□□□ -1.67
SNX3O60493 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.62□□□□□ -1.67
SNX3O60493 AC008083.2-201ENST00000546707 476 ntBASIC4.62□□□□□ -1.67
SNX3O60493 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX3O60493 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.62□□□□□ -1.67
SNX3O60493 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.62□□□□□ -1.67
SNX3O60493 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX3O60493 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNX3O60493 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX3O60493 AC067773.1-201ENST00000603284 1094 ntBASIC4.62□□□□□ -1.67
SNX3O60493 AL391834.1-201ENST00000609609 560 ntBASIC4.62□□□□□ -1.67
SNX3O60493 MIR8084-201ENST00000614105 89 ntBASIC4.62□□□□□ -1.67
SNX3O60493 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNX3O60493 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX3O60493 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX3O60493 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX3O60493 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.62□□□□□ -1.67
SNX3O60493 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX3O60493 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SNX3O60493 AC016588.2-201ENST00000632484 3021 ntBASIC4.62□□□□□ -1.67
SNX3O60493 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX3O60493 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX3O60493 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNX3O60493 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX3O60493 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SNX3O60493 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNX3O60493 MIR16-2-201ENST00000362117 81 ntBASIC4.61□□□□□ -1.67
SNX3O60493 SNORA63.3-201ENST00000362682 132 ntBASIC4.61□□□□□ -1.67
SNX3O60493 RN7SKP187-201ENST00000365536 330 ntBASIC4.61□□□□□ -1.67
SNX3O60493 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX3O60493 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX3O60493 AL645733.1-201ENST00000402250 217 ntBASIC4.61□□□□□ -1.67
SNX3O60493 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.61□□□□□ -1.67
SNX3O60493 RNA5SP498-201ENST00000411342 120 ntBASIC4.61□□□□□ -1.67
SNX3O60493 AC002524.1-201ENST00000411687 547 ntBASIC4.61□□□□□ -1.67
SNX3O60493 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.61□□□□□ -1.67
SNX3O60493 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX3O60493 MTCO1P52-201ENST00000433928 531 ntBASIC4.61□□□□□ -1.67
SNX3O60493 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX3O60493 RPL34P20-201ENST00000442771 351 ntBASIC4.61□□□□□ -1.67
SNX3O60493 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX3O60493 AC069540.1-201ENST00000446320 988 ntBASIC4.61□□□□□ -1.67
SNX3O60493 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX3O60493 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.61□□□□□ -1.67
SNX3O60493 RPS20P4-201ENST00000461659 355 ntBASIC4.61□□□□□ -1.67
SNX3O60493 RN7SL170P-201ENST00000487098 295 ntBASIC4.61□□□□□ -1.67
SNX3O60493 MTND3P3-201ENST00000505004 126 ntBASIC4.61□□□□□ -1.67
SNX3O60493 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX3O60493 AC133963.2-201ENST00000513686 578 ntBASIC4.61□□□□□ -1.67
SNX3O60493 RNU6-334P-201ENST00000517072 102 ntBASIC4.61□□□□□ -1.67
SNX3O60493 SOX5P1-201ENST00000524155 1127 ntBASIC4.61□□□□□ -1.67
SNX3O60493 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.61□□□□□ -1.67
SNX3O60493 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX3O60493 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX3O60493 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX3O60493 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.61□□□□□ -1.67
SNX3O60493 OR1AB1P-201ENST00000585564 761 ntBASIC4.61□□□□□ -1.67
SNX3O60493 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX3O60493 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.61□□□□□ -1.67
SNX3O60493 FO393422.1-201ENST00000603908 708 ntBASIC4.61□□□□□ -1.67
SNX3O60493 AC108865.2-201ENST00000606881 432 ntBASIC4.61□□□□□ -1.67
SNX3O60493 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX3O60493 AC011472.4-201ENST00000615848 491 ntBASIC4.61□□□□□ -1.67
SNX3O60493 AL353662.3-201ENST00000625131 237 ntBASIC4.61□□□□□ -1.67
SNX3O60493 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX3O60493 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNX3O60493 AC106858.1-201ENST00000637497 429 ntBASIC4.61□□□□□ -1.67
SNX3O60493 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SNX3O60493 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SNX3O60493 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX3O60493 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX3O60493 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX3O60493 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SNX3O60493 AL136164.3-201ENST00000624429 3978 ntBASIC4.61□□□□□ -1.67
SNX3O60493 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX3O60493 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SNX3O60493 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX3O60493 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNX3O60493 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SNX3O60493 VDAC2P1-201ENST00000399358 958 ntBASIC4.6□□□□□ -1.67
SNX3O60493 LYPLA1P3-201ENST00000402650 695 ntBASIC4.6□□□□□ -1.67
SNX3O60493 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SNX3O60493 RNA5SP39-201ENST00000411245 120 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms