Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM38O00635 YWHAEP5-201ENST00000431545 765 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM38O00635 CBX1P4-201ENST00000439415 457 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 MTND1P33-201ENST00000446251 917 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 AC005229.2-201ENST00000456995 399 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM38O00635 AC096992.1-201ENST00000459808 709 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 AL161747.1-201ENST00000480068 358 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 METTL15P1-201ENST00000481421 1045 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 AC005912.1-201ENST00000495392 255 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM38O00635 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM38O00635 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM38O00635 AC021193.1-201ENST00000511607 420 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM38O00635 PRELID3BP4-201ENST00000515476 571 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM38O00635 BLZF2P-201ENST00000553776 1130 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM38O00635 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM38O00635 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 AC006363.1-201ENST00000603806 463 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 Z82195.1-201ENST00000604558 398 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM38O00635 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRIM38O00635 FRG1EP-201ENST00000634469 770 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.43□□□□□ -1.54
TRIM38O00635 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM38O00635 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 AC018809.2-201ENST00000602436 3823 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.43□□□□□ -1.54
TRIM38O00635 MTND4P4-201ENST00000439033 1366 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM38O00635 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TRIM38O00635 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TRIM38O00635 AL445437.1-201ENST00000623157 3087 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM38O00635 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.42□□□□□ -1.54
TRIM38O00635 AL133268.1-201ENST00000405676 1401 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
TRIM38O00635 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM38O00635 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TRIM38O00635 U3.2-201ENST00000362981 210 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 RNU6-1339P-201ENST00000363574 91 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 RNU1-74P-201ENST00000384108 171 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 MIR551A-201ENST00000385042 96 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AL603865.2-201ENST00000401679 213 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM38O00635 RN7SKP125-201ENST00000410481 302 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AC092638.1-201ENST00000411966 1275 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 NPM1P40-201ENST00000412758 733 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM38O00635 AC073465.2-201ENST00000440938 498 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 FHP1-201ENST00000442741 703 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AL354710.1-201ENST00000453641 246 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AL035090.1-201ENST00000454835 332 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM38O00635 CDC42P1-201ENST00000456658 548 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 RPL7P32-201ENST00000457119 744 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 RPL7AP6-201ENST00000477943 801 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 ATP5LP5-201ENST00000483050 299 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM38O00635 HPRT1P2-201ENST00000505250 544 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM38O00635 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 AC091163.3-201ENST00000518269 1144 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AC034205.1-201ENST00000520621 638 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM38O00635 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 OR8I1P-201ENST00000529291 931 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TRIM38O00635 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM38O00635 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM38O00635 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM38O00635 OR11J2P-201ENST00000555298 907 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AC009852.2-201ENST00000567898 485 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM38O00635 MIR3691-201ENST00000578066 90 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 MIR4311-201ENST00000580794 100 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 RN7SL708P-201ENST00000580952 299 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms