Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
O00370 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
O00370 RNU6-178P-201ENST00000384631 104 ntBASIC5.05□□□□□ -1.6
O00370 ST13P16-201ENST00000401760 781 ntBASIC5.05□□□□□ -1.6
O00370 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.05□□□□□ -1.6
O00370 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.05□□□□□ -1.6
O00370 RPL7P57-201ENST00000423238 740 ntBASIC5.05□□□□□ -1.6
O00370 FAR1P1-201ENST00000427163 934 ntBASIC5.05□□□□□ -1.6
O00370 MTND4LP14-201ENST00000429447 288 ntBASIC5.05□□□□□ -1.6
O00370 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.05□□□□□ -1.6
O00370 MTND4P15-201ENST00000437913 1033 ntBASIC5.05□□□□□ -1.6
O00370 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
O00370 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.05□□□□□ -1.6
O00370 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.05□□□□□ -1.6
O00370 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
O00370 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.05□□□□□ -1.6
O00370 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.05□□□□□ -1.6
O00370 OR7H2P-201ENST00000513483 306 ntBASIC5.05□□□□□ -1.6
O00370 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.05□□□□□ -1.6
O00370 RNU1-6P-201ENST00000516290 144 ntBASIC5.05□□□□□ -1.6
O00370 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.05□□□□□ -1.6
O00370 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.05□□□□□ -1.6
O00370 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.05□□□□□ -1.6
O00370 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.05□□□□□ -1.6
O00370 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.05□□□□□ -1.6
O00370 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
O00370 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.05□□□□□ -1.6
O00370 uc_338.18-201ENST00000615451 175 ntBASIC5.05□□□□□ -1.6
O00370 AC091953.3-201ENST00000623220 236 ntBASIC5.05□□□□□ -1.6
O00370 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
O00370 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
O00370 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
O00370 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.05□□□□□ -1.6
O00370 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
O00370 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.05□□□□□ -1.6
O00370 DDX6P1-205ENST00000441966 1436 ntBASIC5.05□□□□□ -1.6
O00370 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
O00370 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
O00370 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.04□□□□□ -1.6
O00370 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
O00370 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
O00370 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.04□□□□□ -1.6
O00370 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.04□□□□□ -1.6
O00370 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
O00370 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.04□□□□□ -1.6
O00370 RNU1-82P-201ENST00000390851 165 ntBASIC5.04□□□□□ -1.6
O00370 AL590762.2-201ENST00000395798 571 ntBASIC5.04□□□□□ -1.6
O00370 AL133270.1-201ENST00000402635 279 ntBASIC5.04□□□□□ -1.6
O00370 AL512430.2-201ENST00000406786 339 ntBASIC5.04□□□□□ -1.6
O00370 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.04□□□□□ -1.6
O00370 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.04□□□□□ -1.6
O00370 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.04□□□□□ -1.6
O00370 CYCSP10-201ENST00000417973 294 ntBASIC5.04□□□□□ -1.6
O00370 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.04□□□□□ -1.6
O00370 OR6K4P-201ENST00000423179 955 ntBASIC5.04□□□□□ -1.6
O00370 AL360081.1-201ENST00000428299 555 ntBASIC5.04□□□□□ -1.6
O00370 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.04□□□□□ -1.6
O00370 AC004938.1-201ENST00000438468 308 ntBASIC5.04□□□□□ -1.6
O00370 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.04□□□□□ -1.6
O00370 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.04□□□□□ -1.6
O00370 AL354710.1-201ENST00000453641 246 ntBASIC5.04□□□□□ -1.6
O00370 AL645937.3-201ENST00000453647 936 ntBASIC5.04□□□□□ -1.6
O00370 AC083982.1-201ENST00000485679 344 ntBASIC5.04□□□□□ -1.6
O00370 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.04□□□□□ -1.6
O00370 FABP5P6-201ENST00000510588 409 ntBASIC5.04□□□□□ -1.6
O00370 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.04□□□□□ -1.6
O00370 RN7SKP276-201ENST00000516242 268 ntBASIC5.04□□□□□ -1.6
O00370 AC067904.2-201ENST00000517322 1283 ntBASIC5.04□□□□□ -1.6
O00370 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.04□□□□□ -1.6
O00370 NPM1P35-201ENST00000533043 868 ntBASIC5.04□□□□□ -1.6
O00370 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.04□□□□□ -1.6
O00370 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.04□□□□□ -1.6
O00370 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.04□□□□□ -1.6
O00370 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.04□□□□□ -1.6
O00370 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.04□□□□□ -1.6
O00370 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
O00370 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.04□□□□□ -1.6
O00370 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
O00370 AC073429.2-201ENST00000569694 1444 ntBASIC5.04□□□□□ -1.6
O00370 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
O00370 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
O00370 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
O00370 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
O00370 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
O00370 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
O00370 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
O00370 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
O00370 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.03□□□□□ -1.6
O00370 AL359922.3-201ENST00000624779 1670 ntBASIC5.03□□□□□ -1.6
O00370 ZFRP1-201ENST00000457579 2970 ntBASIC5.03□□□□□ -1.6
O00370 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
O00370 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
O00370 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
O00370 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
O00370 RNU4-39P-201ENST00000362455 127 ntBASIC5.03□□□□□ -1.6
O00370 AC093719.1-202ENST00000392735 373 ntBASIC5.03□□□□□ -1.6
O00370 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
O00370 RNA5SP146-201ENST00000410743 123 ntBASIC5.03□□□□□ -1.6
O00370 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.03□□□□□ -1.6
O00370 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms