Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAI2Q9Y5P3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAI2Q9Y5P3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RAI2Q9Y5P3 ICE2P1-201ENST00000512800 1849 ntBASIC5.13□□□□□ -1.59
RAI2Q9Y5P3 NXF4-202ENST00000416098 1465 ntBASIC5.13□□□□□ -1.59
RAI2Q9Y5P3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RAI2Q9Y5P3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RAI2Q9Y5P3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC003985.2-201ENST00000562268 1669 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 RNU1-85P-201ENST00000364127 164 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 HMGB1P10-201ENST00000395823 563 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 U3.32-201ENST00000408116 212 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 RPL26P37-201ENST00000411983 438 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 UBE2V1P9-201ENST00000414760 368 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 OR51A6P-201ENST00000418680 1004 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 TPTE2P3-201ENST00000441562 1189 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 RPL34P20-201ENST00000442771 351 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC004980.3-201ENST00000447046 365 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 MTND2P8-201ENST00000450555 1025 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 CYCSP20-201ENST00000473154 315 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 RPL21P47-201ENST00000483696 477 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC026979.1-201ENST00000492525 396 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 MYL12BP2-201ENST00000503948 512 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AP001804.2-201ENST00000533932 910 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 EDDM3DP-201ENST00000554692 434 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC010735.1-201ENST00000567305 1026 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 MTCO2P22-201ENST00000603246 681 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC105254.2-201ENST00000603636 436 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC067838.1-201ENST00000606064 577 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC087385.3-201ENST00000620477 187 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 MIR7703-201ENST00000620784 77 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC006927.2-201ENST00000639256 389 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AL359715.4-201ENST00000606629 1436 ntBASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAI2Q9Y5P3 AC026523.2-201ENST00000625039 7739 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC063976.2-201ENST00000425667 3556 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 RNA5SP388-201ENST00000362584 119 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 RNU5E-10P-201ENST00000363506 118 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 RNA5SP455-201ENST00000365190 119 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 RPL17P50-201ENST00000396131 546 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AP002784.2-201ENST00000397300 549 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms