Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AL049830.4-201ENST00000555149 351 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 OR1F2P-201ENST00000570470 933 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 MIR4436B2-201ENST00000581415 91 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC011840.5-201ENST00000582125 771 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 MIR4436B1-201ENST00000583272 91 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 PART1_2.1-201ENST00000612397 250 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC093783.1-201ENST00000612976 329 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC073869.8-201ENST00000641806 335 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC011755.1-201ENST00000623763 2049 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC104260.2-201ENST00000623551 3497 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC007342.7-201ENST00000624610 2337 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 BTBD10P1-201ENST00000549824 1352 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC092681.1-201ENST00000297369 291 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 NUDT19P3-201ENST00000404698 555 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 RPSAP35-201ENST00000413753 818 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 RPL7P34-201ENST00000433316 712 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 PSMD10P3-201ENST00000437000 448 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 TCEA1P3-201ENST00000443005 880 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 MTND2P22-201ENST00000444325 1033 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC069540.1-201ENST00000446320 988 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 DNAJB5P1-201ENST00000454004 806 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 RPL6P9-201ENST00000466502 859 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC097484.1-201ENST00000471148 389 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC090114.3-201ENST00000479267 829 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC134050.1-201ENST00000495088 933 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 ENPP7P11-201ENST00000505915 627 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC012400.1-201ENST00000518452 381 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 LRRC6P1-201ENST00000532188 885 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 LSM3P2-201ENST00000551246 273 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 EDDM3DP-201ENST00000554692 434 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC009097.3-201ENST00000563557 1018 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC145350.1-201ENST00000567426 208 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC231759.1-201ENST00000616455 597 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 U6.48-201ENST00000618523 106 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC104985.3-201ENST00000623479 597 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AP003485.2-201ENST00000623636 610 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 AC068870.1-201ENST00000563737 2455 ntBASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX2IPQ9Y2D8 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC027228.2-201ENST00000567141 2154 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms