Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 USP9YP19-201ENST00000412165 485 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 OR51A6P-201ENST00000418680 1004 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AC068287.1-201ENST00000430283 295 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 HMGB3P10-201ENST00000434734 572 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AL157884.3-201ENST00000448273 1184 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 MTCYBP19-201ENST00000517463 1124 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AC100784.1-201ENST00000522790 310 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 HMGB3P26-201ENST00000560051 582 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 RPL26P30-202ENST00000602923 645 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AC104687.2-201ENST00000604442 342 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AL135786.2-201ENST00000608422 615 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 MIR6758-201ENST00000620653 63 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AL133243.3-201ENST00000617415 3004 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AC107027.3-201ENST00000565095 3473 ntBASIC4.87□□□□□ -1.63
SATB2Q9UPW6 AC093535.2-201ENST00000624769 2326 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC063976.2-201ENST00000425667 3556 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC126755.2-208ENST00000327792 462 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC138969.1-213ENST00000331436 462 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 RNU4-39P-201ENST00000362455 127 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 MIR708-201ENST00000390708 88 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 SNORA11-201ENST00000408789 128 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC019070.1-201ENST00000415008 1024 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC092570.3-201ENST00000420113 693 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 RPS12P5-201ENST00000423449 371 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 OR2AH1P-201ENST00000425717 928 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 MTATP6P11-201ENST00000428071 670 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AP002345.1-201ENST00000456493 928 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC006967.1-201ENST00000467608 589 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC108157.1-201ENST00000510511 539 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC006349.1-201ENST00000555526 235 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 MIMT1-201ENST00000597105 1050 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC067931.1-201ENST00000624190 671 ntBASIC4.86□□□□□ -1.63
SATB2Q9UPW6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SATB2Q9UPW6 MAPK10-263ENST00000641052 4307 ntBASIC4.85□□□□□ -1.63
SATB2Q9UPW6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SATB2Q9UPW6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SATB2Q9UPW6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SATB2Q9UPW6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SATB2Q9UPW6 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms