Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AF038458.1-201ENST00000588406 262 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC010615.1-201ENST00000594254 1764 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 RNU6-1339P-201ENST00000363574 91 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 RNU6-996P-201ENST00000365438 107 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 RNU6-769P-201ENST00000384407 104 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC092745.2-202ENST00000411880 369 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC083862.1-201ENST00000427378 1242 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AP001324.1-201ENST00000428553 399 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AF228730.2-201ENST00000438784 848 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AL845321.1-201ENST00000444603 348 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 MGAT2P1-201ENST00000449718 797 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 SLAMF6P1-201ENST00000451067 602 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AL606490.1-201ENST00000452266 765 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 HMGB1P15-201ENST00000453854 435 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 MEMO1P3-201ENST00000459811 302 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC023194.2-201ENST00000465398 406 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 H3F3AP3-201ENST00000497682 407 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 SNORA81.3-201ENST00000517283 198 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 FXNP1-201ENST00000555153 337 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AL121579.2-201ENST00000555466 590 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC023827.2-201ENST00000566880 1061 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 MIR3167-201ENST00000579623 85 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC093635.1-201ENST00000609028 555 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 AP005212.3-201ENST00000619964 528 ntBASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 PFKM-232ENST00000629846 381 ntTSL 4 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TRIM35Q9UPQ4 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RPL12P13-201ENST00000310055 497 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RPL32P3-201ENST00000359025 275 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 Y_RNA.270-201ENST00000364693 104 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 Y_RNA.373-201ENST00000365600 103 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 SUGT1P1-201ENST00000379514 476 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 Y_RNA.414-201ENST00000384011 101 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RNA5SP176-201ENST00000390956 110 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RPS20P2-201ENST00000402520 389 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RNU6-954P-201ENST00000411355 107 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RGS17P1-201ENST00000423358 553 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RPSAP24-201ENST00000461543 873 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RPL7P5-201ENST00000471472 736 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RN7SL868P-201ENST00000485915 303 ntBASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms