Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC004263.1-201ENST00000479327 332 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 RPS4XP1-201ENST00000482189 787 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 RN7SL97P-201ENST00000486780 299 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 RN7SL808P-201ENST00000496066 299 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 OR8A2P-201ENST00000528631 952 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 BNIP3P24-201ENST00000593398 557 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 DUXAP3-201ENST00000603616 594 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AL445222.1-201ENST00000607259 628 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AL049539.1-201ENST00000611964 459 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC011472.4-201ENST00000615848 491 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC231759.1-201ENST00000616455 597 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC090897.3-201ENST00000636973 1157 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC119674.1-212ENST00000641155 993 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 SRRM1P3-201ENST00000426911 2678 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AL034549.2-201ENST00000618285 3373 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 MUC2-202ENST00000613187 4845 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AC112198.2-201ENST00000426589 6996 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 RNU4-68P-201ENST00000364314 141 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 RNU6-244P-201ENST00000391028 104 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AL136310.1-201ENST00000404926 654 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 RBMY2KP-201ENST00000418221 992 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AL590762.4-201ENST00000425885 253 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 FABP7P2-201ENST00000429946 379 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AC006335.2-201ENST00000437993 330 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AC006466.1-201ENST00000438721 289 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 RPS6P2-201ENST00000454208 705 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AC108161.1-201ENST00000461060 402 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 RPS21P4-201ENST00000487122 248 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AP000563.1-201ENST00000490865 758 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AC091912.1-201ENST00000511351 248 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 MTCO2P15-201ENST00000532655 656 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 CR383656.6-201ENST00000550518 394 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 MTND4P33-201ENST00000556706 766 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 U6.48-201ENST00000618523 106 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 AP001784.1-201ENST00000624107 428 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 SOCS5P3-201ENST00000425115 1576 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 RLIMP2-201ENST00000427891 1563 ntBASIC5.24□□□□□ -1.57
VPS4AQ9UN37 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms