Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RNA5SP360-201ENST00000516555 118 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC107918.3-201ENST00000533272 382 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC068790.4-201ENST00000602474 263 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC005520.3-201ENST00000602874 370 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC130352.1-201ENST00000602979 661 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC023813.4-201ENST00000607580 580 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC083809.1-201ENST00000615051 472 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC022960.2-201ENST00000616300 666 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AP002967.1-201ENST00000624203 539 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC015813.6-201ENST00000624409 5808 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 ZNF137P-201ENST00000456718 1920 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 AL590240.1-201ENST00000334118 313 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 MTCO1P51-201ENST00000427672 1060 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 AC034205.1-201ENST00000520621 638 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 AC105129.1-201ENST00000560250 297 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 MTND2P13-201ENST00000577438 1039 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 COX6CP4-201ENST00000605798 228 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 AC097505.1-201ENST00000610199 565 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 A2MP1-204ENST00000566278 4130 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 AL672167.1-205ENST00000641112 3080 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 MFSD8-216ENST00000641147 4009 ntBASIC5.55□□□□□ -1.52
CTNNA3Q9UI47 AC125257.1-201ENST00000560400 2930 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 RNA5SP505-201ENST00000364748 108 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 RPS3AP23-201ENST00000401762 784 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 RAB9AP4-201ENST00000415230 609 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AC096644.3-201ENST00000416788 338 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AL359265.2-201ENST00000434367 631 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 RPS6P2-201ENST00000454208 705 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 SULT1C2P2-201ENST00000562517 294 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 MIR5096-201ENST00000583713 70 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AC004241.3-201ENST00000611728 517 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AC244517.3-201ENST00000616254 1235 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 U3.53-201ENST00000628922 216 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 AC135352.1-201ENST00000506173 1418 ntBASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA3Q9UI47 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AL355852.1-201ENST00000454081 1771 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 SNORA71.2-201ENST00000364941 134 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms