Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 RN7SKP11-201ENST00000517018 287 ntBASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 AC130324.3-201ENST00000614165 542 ntBASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 AL354950.2-201ENST00000617939 290 ntBASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 MRPL57P3-201ENST00000619218 176 ntBASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 AC022106.2-201ENST00000620114 757 ntBASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 MIR6806-201ENST00000622141 64 ntBASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 TRIM51GP-201ENST00000534741 1350 ntBASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 AL359922.2-201ENST00000581788 3017 ntBASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 NBPF8-201ENST00000583271 5330 ntBASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 FANCD2P2-201ENST00000437591 1400 ntBASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 FER-202ENST00000438717 1531 ntTSL 2 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 PRNCR1-201ENST00000635449 12727 ntBASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
LIMD1Q9UGP4 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 MTND5P16-201ENST00000460269 1703 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 HSPA8P18-201ENST00000439846 1928 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 RNA5SP382-201ENST00000363355 112 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 Y_RNA.184-201ENST00000363884 108 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 RNU6-853P-201ENST00000364306 107 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 RNU6-169P-201ENST00000365336 107 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 VDAC1P2-201ENST00000423609 850 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 SLC25A18P1-201ENST00000449385 454 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 Y_RNA.639-201ENST00000458981 102 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 Y_RNA.631-201ENST00000459607 101 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AC078785.3-201ENST00000476607 425 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 RPL7P39-201ENST00000481157 744 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AC090096.1-201ENST00000489168 390 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 EIF4EP3-201ENST00000498782 656 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 MIR3118-1-201ENST00000581787 76 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AL022345.1-201ENST00000607292 135 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AL158196.1-201ENST00000616786 434 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 MIR6861-201ENST00000618657 64 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AL591926.1-201ENST00000620542 217 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AC091953.2-201ENST00000623979 160 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AC005858.3-201ENST00000624756 589 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AL078596.1-201ENST00000624856 447 ntBASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.41□□□□□ -1.22
LIMD1Q9UGP4 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms