Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 NACA3P-201ENST00000359690 648 ntBASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 RPL5P24-201ENST00000463742 885 ntBASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 AC010374.1-201ENST00000503762 1237 ntBASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 MTCO1P46-201ENST00000451639 1491 ntBASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.91□□□□□ -1.3
RIMBP3Q9UFD9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 ACEA_U3.1-201ENST00000363057 217 ntBASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 AL512649.1-201ENST00000428997 581 ntBASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 RPS20P21-201ENST00000466859 343 ntBASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 AC110792.1-201ENST00000491826 472 ntBASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 AC021193.1-201ENST00000511607 420 ntBASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 AC074029.4-201ENST00000624796 1859 ntBASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RIMBP3Q9UFD9 PRO1804-201ENST00000623780 2050 ntBASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 RNA5SP267-201ENST00000364893 126 ntBASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 TBCAP1-201ENST00000436520 327 ntBASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 GNRHR2P1-201ENST00000555315 631 ntBASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 MIR3922-201ENST00000585192 84 ntBASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 AC025175.1-201ENST00000606482 759 ntBASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 NOL8P1-201ENST00000508336 3529 ntBASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC6.9□□□□□ -1.31
RIMBP3Q9UFD9 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 RPL7P58-201ENST00000402913 758 ntBASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 RPL37P3-201ENST00000456825 293 ntBASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 AC104164.2-201ENST00000496953 495 ntBASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 HMGN1P15-201ENST00000513870 295 ntBASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 AC005255.1-201ENST00000593748 216 ntBASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 MIR6715A-201ENST00000615929 79 ntBASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.89□□□□□ -1.31
RIMBP3Q9UFD9 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 CTSL3P-202ENST00000412179 788 ntBASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 MTND2P40-201ENST00000436718 841 ntBASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 AL592436.1-201ENST00000605135 558 ntBASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 AL162574.1-201ENST00000615702 950 ntBASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 FP236240.3-201ENST00000623061 327 ntBASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RIMBP3Q9UFD9 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 U3.26-201ENST00000391236 204 ntBASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 AL512326.1-201ENST00000443050 721 ntBASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 AL359757.2-201ENST00000624309 274 ntBASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RIMBP3Q9UFD9 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms