Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 PPIAP13-201ENST00000434706 478 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 RN7SL41P-201ENST00000476144 297 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 BTG4P1-201ENST00000510421 183 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 RN7SKP21-201ENST00000516503 220 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 GLRXP2-201ENST00000555594 321 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 MIR4675-201ENST00000577898 77 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 BPIFA4P-203ENST00000603168 689 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 AC006338.2-201ENST00000616864 791 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 AC099654.11-201ENST00000638857 294 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 ICE2P1-201ENST00000512800 1849 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AL358176.3-201ENST00000420757 454 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 ACTR3P2-201ENST00000439585 1257 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AC010326.1-201ENST00000462726 602 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 RNA5SP73-201ENST00000516744 108 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AC010857.1-201ENST00000606398 594 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 OR7A19P-201ENST00000608051 733 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AL353600.1-201ENST00000608148 251 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 MIR7154-201ENST00000620673 73 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 MTCO1P7-201ENST00000419523 1542 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AC083843.2-201ENST00000568248 6253 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 LINC00622-201ENST00000562811 1570 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 MIR129-1-201ENST00000384972 72 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 SNRPFP1-201ENST00000414761 252 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 UBTFL3-201ENST00000418934 1024 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 OR6C64P-201ENST00000419708 825 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AL691449.1-201ENST00000426570 421 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 RPL5P30-201ENST00000465511 891 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AC090142.1-201ENST00000465776 462 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 UBTFL6-201ENST00000477929 1024 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AC106806.2-201ENST00000509365 500 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 TCP11X3P-202ENST00000514289 1254 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AC103792.1-201ENST00000603591 919 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AC067959.1-201ENST00000604334 379 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AL354984.3-201ENST00000604803 325 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 SNORD91B-202ENST00000608459 222 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AC012409.3-201ENST00000611343 981 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 MIR6830-201ENST00000636015 70 ntBASIC4.24□□□□□ -1.73
CCDC88CQ9P219 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC88CQ9P219 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 AL078595.2-201ENST00000605309 1780 ntBASIC4.23□□□□□ -1.73
CCDC88CQ9P219 AC139426.3-201ENST00000605648 2059 ntBASIC4.23□□□□□ -1.73
CCDC88CQ9P219 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 AC092435.4-201ENST00000623012 4159 ntBASIC4.23□□□□□ -1.73
CCDC88CQ9P219 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 GTF2IP2-201ENST00000424290 697 ntBASIC4.23□□□□□ -1.73
CCDC88CQ9P219 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 RN7SL98P-201ENST00000462271 300 ntBASIC4.23□□□□□ -1.73
CCDC88CQ9P219 RN7SL691P-201ENST00000494487 301 ntBASIC4.23□□□□□ -1.73
CCDC88CQ9P219 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 MIR4284-201ENST00000578924 81 ntBASIC4.23□□□□□ -1.73
CCDC88CQ9P219 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 AL590392.1-201ENST00000604960 446 ntBASIC4.23□□□□□ -1.73
CCDC88CQ9P219 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC88CQ9P219 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms