Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 AC023158.2-201ENST00000614876 543 ntBASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 AC090246.1-201ENST00000616499 426 ntBASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 MIR6133-201ENST00000617057 108 ntBASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 AC016717.3-201ENST00000624730 554 ntBASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 MIR4278-201ENST00000636094 69 ntBASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 Z98755.1-201ENST00000407015 1384 ntBASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 AC025263.3-201ENST00000622965 1396 ntBASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 AL049737.1-201ENST00000413920 1403 ntBASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DNAJC28Q9NX36 AC011933.2-201ENST00000578539 2790 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 MFSD8-239ENST00000641590 2479 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 GTF2IP4-201ENST00000453092 2054 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AL355852.1-201ENST00000454081 1771 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AP000776.1-201ENST00000530032 1663 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 SGO1P2-201ENST00000429458 1589 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC133552.1-201ENST00000569988 4007 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 HMGB1P5-201ENST00000255320 642 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 SNORA64.1-201ENST00000362600 132 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 RN7SKP160-201ENST00000363804 340 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 RNU1-136P-201ENST00000384181 164 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 ATP5F1P3-201ENST00000397213 657 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 MTCO3P21-201ENST00000430791 643 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 RPS12P17-201ENST00000438591 377 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC092809.1-201ENST00000441469 474 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 RPL21P134-201ENST00000453468 483 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 HMGB1P4-201ENST00000455362 567 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 RPL23AP12-201ENST00000467573 473 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 RPSAP51-201ENST00000497462 645 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC027308.1-201ENST00000517993 110 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 CDC42P3-201ENST00000518493 633 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC138832.1-201ENST00000522871 556 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC018442.3-201ENST00000523025 183 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 NANOGP3-201ENST00000605855 286 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC079395.2-201ENST00000610982 737 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC008115.3-201ENST00000614874 549 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AC015726.3-201ENST00000624501 418 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 ATE1-AS1-202ENST00000636460 506 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 AL161912.4-201ENST00000623889 2468 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 SMG1P7-201ENST00000565246 2704 ntBASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
DNAJC28Q9NX36 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 FAM3C2-201ENST00000312214 681 ntBASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 RNA5SP132-201ENST00000364725 118 ntBASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 BMS1P3-201ENST00000372011 932 ntBASIC5.72□□□□□ -1.49
DNAJC28Q9NX36 SNORD65.1-201ENST00000390889 71 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms