Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNU6-225P-201ENST00000384613 103 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 RNU6-1242P-201ENST00000391052 103 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 PEX12P1-201ENST00000400284 1048 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 RN7SKP126-201ENST00000411143 300 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC211486.3-201ENST00000412694 621 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 OR4K6P-201ENST00000416478 897 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 RAC1P8-201ENST00000427086 527 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 TXNL1P1-201ENST00000429528 554 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AL772161.1-201ENST00000439130 476 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 KATNBL1P3-201ENST00000443475 909 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 Z99714.1-201ENST00000450463 807 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC092754.1-201ENST00000472975 479 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC090114.3-201ENST00000479267 829 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC082651.2-201ENST00000496833 166 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 GAPDHP62-201ENST00000515313 990 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 CDH12P4-201ENST00000517835 295 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 CDH12P3-201ENST00000517935 295 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 CDH12P1-201ENST00000518435 295 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VTA1Q9NP79 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC135279.1-201ENST00000543493 504 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 OR1F2P-201ENST00000570470 933 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 RN7SL356P-201ENST00000582228 248 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 VN1R83P-201ENST00000595685 445 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 MRPS35P3-201ENST00000603189 709 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC093783.1-201ENST00000612976 329 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 ZNF663P-202ENST00000641770 1131 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AC138393.1-206ENST00000540997 1886 ntBASIC6.06□□□□□ -1.44
VTA1Q9NP79 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VTA1Q9NP79 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VTA1Q9NP79 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VTA1Q9NP79 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VTA1Q9NP79 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VTA1Q9NP79 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VTA1Q9NP79 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VTA1Q9NP79 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 RNA5SP443-201ENST00000363083 132 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 DBIP1-201ENST00000401435 260 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 DPPA2P2-201ENST00000418220 897 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 RPS24P8-201ENST00000431490 402 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 AL008629.1-201ENST00000438615 184 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AL929288.2-201ENST00000446368 407 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC009127.1-201ENST00000467090 155 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC012123.2-201ENST00000485809 248 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC090058.1-201ENST00000498788 435 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VTA1Q9NP79 IMPA1P1-201ENST00000510718 842 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 Y_RNA.688-201ENST00000516565 95 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AL354943.1-201ENST00000572103 781 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 MIR4436B2-201ENST00000581415 91 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 MIR4436B1-201ENST00000583272 91 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC124856.1-201ENST00000600819 896 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 BNIP3P4-201ENST00000604946 565 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 AL592148.2-201ENST00000612210 372 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC139769.3-201ENST00000618383 175 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC099494.2-201ENST00000623371 978 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 AP003497.2-201ENST00000624220 967 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms