Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.18□□□□□ -1.74
CHD8Q9HCK8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 AC027228.2-201ENST00000567141 2154 ntBASIC4.18□□□□□ -1.74
CHD8Q9HCK8 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 AL136164.3-201ENST00000624429 3978 ntBASIC4.18□□□□□ -1.74
CHD8Q9HCK8 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 NPM1P34-201ENST00000428821 893 ntBASIC4.18□□□□□ -1.74
CHD8Q9HCK8 AL451139.1-201ENST00000434718 346 ntBASIC4.18□□□□□ -1.74
CHD8Q9HCK8 AC018635.1-201ENST00000468292 1030 ntBASIC4.18□□□□□ -1.74
CHD8Q9HCK8 AC017015.1-201ENST00000477387 286 ntBASIC4.18□□□□□ -1.74
CHD8Q9HCK8 AL592156.1-201ENST00000508758 304 ntBASIC4.18□□□□□ -1.74
CHD8Q9HCK8 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 AC119674.1-212ENST00000641155 993 ntBASIC4.18□□□□□ -1.74
CHD8Q9HCK8 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 AP001157.1-201ENST00000550837 2339 ntBASIC4.18□□□□□ -1.74
CHD8Q9HCK8 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHD8Q9HCK8 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 MIR449A-201ENST00000362113 91 ntBASIC4.17□□□□□ -1.74
CHD8Q9HCK8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 RPS3AP14-201ENST00000483907 780 ntBASIC4.17□□□□□ -1.74
CHD8Q9HCK8 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 AP001642.1-201ENST00000624727 2117 ntBASIC4.17□□□□□ -1.74
CHD8Q9HCK8 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 AC016588.2-201ENST00000632484 3021 ntBASIC4.17□□□□□ -1.74
CHD8Q9HCK8 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 AL031121.1-201ENST00000406553 254 ntBASIC4.17□□□□□ -1.74
CHD8Q9HCK8 RAB9AP3-201ENST00000412737 573 ntBASIC4.17□□□□□ -1.74
CHD8Q9HCK8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 RAB9AP1-201ENST00000449393 573 ntBASIC4.17□□□□□ -1.74
CHD8Q9HCK8 NANOGP10-201ENST00000453325 895 ntBASIC4.17□□□□□ -1.74
CHD8Q9HCK8 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 OR7E13P-201ENST00000526052 910 ntBASIC4.17□□□□□ -1.74
CHD8Q9HCK8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 AL442128.2-201ENST00000620246 1824 ntBASIC4.17□□□□□ -1.74
CHD8Q9HCK8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 AC138907.8-201ENST00000623981 2256 ntBASIC4.17□□□□□ -1.74
CHD8Q9HCK8 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.17□□□□□ -1.74
CHD8Q9HCK8 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AC135352.1-201ENST00000506173 1418 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 QRSL1P2-201ENST00000418582 964 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AL034408.1-202ENST00000636088 415 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AC009779.8-201ENST00000641684 4384 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AC115285.1-201ENST00000424879 736 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 DHFRP3-201ENST00000455595 559 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 RN7SKP98-201ENST00000517070 156 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 IGHVIII-13-1-201ENST00000517613 291 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 MIR5685-201ENST00000579080 79 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms