Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RNU6-467P-201ENST00000517027 110 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 AC025423.2-201ENST00000537570 439 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 MIR6729-201ENST00000618194 65 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 AC091905.4-201ENST00000623432 202 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 AC020978.9-201ENST00000624380 1141 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 MTCO1P15-201ENST00000529569 1526 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 RAD23BP1-201ENST00000421404 1227 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 AC079355.1-201ENST00000421770 223 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 PRELID3BP10-201ENST00000431957 584 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 Z85994.2-201ENST00000434327 452 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 OR52Y1P-201ENST00000452418 828 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 AL356390.1-201ENST00000455684 397 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 SCARNA10-201ENST00000459255 330 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 AC010469.1-201ENST00000463864 576 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 COL6A4P2-205ENST00000509855 506 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 GCSHP4-201ENST00000538792 439 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 AC090079.2-201ENST00000575289 768 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 AC090181.2-201ENST00000602975 672 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 QTRT1P1-201ENST00000604344 1078 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 AC022467.1-201ENST00000614738 749 ntBASIC5.49□□□□□ -1.53
UPF2Q9HAU5 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.49□□□□□ -1.53
UPF2Q9HAU5 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 CUL4AP1-201ENST00000514750 1863 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 MT-RNR1-201ENST00000389680 954 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AL607077.1-201ENST00000401718 499 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AC233289.1-201ENST00000403700 508 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AC093162.1-201ENST00000419682 124 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AL034379.1-201ENST00000423216 253 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 RPS6P14-201ENST00000425165 719 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AC006518.1-201ENST00000541449 943 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AP005119.2-201ENST00000579735 1105 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AC092474.3-201ENST00000603022 568 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AL121612.2-201ENST00000612261 482 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 AL391262.2-201ENST00000622466 494 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 U3.53-201ENST00000628922 216 ntBASIC5.48□□□□□ -1.53
UPF2Q9HAU5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF2Q9HAU5 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 ZNF137P-201ENST00000456718 1920 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 SNORA74C-2-201ENST00000411179 201 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 AL356806.1-201ENST00000422524 916 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 CYCSP11-201ENST00000436426 315 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 AL591363.1-201ENST00000450091 483 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 snoU13.20-201ENST00000459180 104 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms