Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 BX005019.1-201ENST00000561881 1810 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VPS11Q9H270 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS11Q9H270 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 RNU4-92P-201ENST00000363783 136 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 Y_RNA.248-201ENST00000364501 109 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 RN7SKP81-201ENST00000365603 331 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS11Q9H270 MIR551B-201ENST00000384984 96 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
VPS11Q9H270 HMGB3P18-201ENST00000406327 590 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 AC002524.1-201ENST00000411687 547 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 USP9YP33-201ENST00000412220 421 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 RPL35AP3-201ENST00000414680 288 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS11Q9H270 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC108479.1-201ENST00000431142 427 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 GTF2IP3-201ENST00000433887 494 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 AL596276.1-201ENST00000434465 418 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 RPL7P29-201ENST00000437151 728 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 RPL12P18-201ENST00000437175 325 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 BMS1P10-201ENST00000443754 1120 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS11Q9H270 RPL31P44-201ENST00000447680 377 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AL589880.1-201ENST00000448271 287 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 MTND3P10-201ENST00000450967 341 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 MEMO1P4-201ENST00000453590 386 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC005410.1-202ENST00000460347 485 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 AL157777.1-201ENST00000468100 304 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 SNRPCP11-201ENST00000492453 205 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC113367.2-201ENST00000505749 160 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC105384.2-201ENST00000508433 640 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS11Q9H270 RPS27AP18-201ENST00000515536 459 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 SEPT10P1-201ENST00000517342 1162 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS11Q9H270 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 AP002812.4-201ENST00000532139 286 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 CENPUP2-201ENST00000555897 1186 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC068768.2-201ENST00000602352 343 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 AC079315.1-201ENST00000602952 623 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 AC126118.1-201ENST00000607744 628 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AP000255.1-201ENST00000610276 676 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 AC138749.5-201ENST00000611461 208 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 AL139099.4-201ENST00000614802 114 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS11Q9H270 AL357140.4-201ENST00000636827 412 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VPS11Q9H270 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.77□□□□□ -1.49
VPS11Q9H270 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
VPS11Q9H270 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS11Q9H270 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VPS11Q9H270 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VPS11Q9H270 Y_RNA.472-201ENST00000384322 102 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 RNA5SP187-201ENST00000384400 119 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 YWHAZP6-201ENST00000399764 738 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 RN7SKP273-201ENST00000411392 314 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AL133482.1-201ENST00000415988 498 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VPS11Q9H270 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS11Q9H270 GNG5P5-201ENST00000420444 220 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 RPL7P30-201ENST00000420888 709 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AC246680.2-201ENST00000422106 389 ntBASIC5.76□□□□□ -1.49
VPS11Q9H270 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS11Q9H270 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms