Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RPL21P7-201ENST00000557463 483 ntBASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 OR7M1P-201ENST00000608946 533 ntBASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 AP005019.3-201ENST00000620418 560 ntBASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 IL6STP1-201ENST00000346911 1020 ntBASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 RNA5SP388-201ENST00000362584 119 ntBASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 SNORA57.1-201ENST00000391227 145 ntBASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 ARL4AP3-201ENST00000441452 574 ntBASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 SUMO2P4-201ENST00000504193 276 ntBASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AL109766.1-201ENST00000555080 552 ntBASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AC023762.1-201ENST00000603280 584 ntBASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AL109618.2-201ENST00000605527 211 ntBASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AP001002.1-201ENST00000625148 1513 ntBASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 AL355852.1-201ENST00000454081 1771 ntBASIC5.5□□□□□ -1.53
RPAP1Q9BWH6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 SEPT7P8-201ENST00000413308 775 ntBASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 RPL7AP25-201ENST00000423357 805 ntBASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 RPL21P91-201ENST00000429231 479 ntBASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 AL935212.3-201ENST00000450729 284 ntBASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 AC005008.1-201ENST00000456151 612 ntBASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 AC135999.1-201ENST00000478962 479 ntBASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 SLC25A15P5-201ENST00000508033 253 ntBASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 RPL7P50-201ENST00000600588 727 ntBASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 AC090181.2-201ENST00000602975 672 ntBASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 HCFC2P1-201ENST00000392864 1592 ntBASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPAP1Q9BWH6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 OR51C1P-202ENST00000641159 1444 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 NOL8P1-201ENST00000508336 3529 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 RNA5SP515-201ENST00000364570 118 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 RPL23AP59-201ENST00000399415 461 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 KCTD10P1-201ENST00000434203 625 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AC021483.2-201ENST00000567415 758 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 MIR3939-201ENST00000582614 106 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AC026979.4-201ENST00000606555 645 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AL121890.2-201ENST00000617644 465 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 SMG1P4-204ENST00000523028 4131 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AC108467.2-201ENST00000617640 1597 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms