Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 Y_RNA.238-201ENST00000364441 102 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 RNU6-541P-201ENST00000384709 110 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 RPL9P21-201ENST00000392269 505 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 Y_RNA.619-201ENST00000410951 90 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 CRYBB2P1-203ENST00000415709 538 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 RAD23BP1-201ENST00000421404 1227 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 PDSS1P1-201ENST00000422953 1114 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 MGAT2P2-201ENST00000427194 797 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AF213884.1-201ENST00000488102 463 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC026782.2-201ENST00000510845 636 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 RNU6-615P-201ENST00000516065 106 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC009643.1-201ENST00000532030 391 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC244502.2-201ENST00000543361 851 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AL049872.1-201ENST00000556323 322 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC005084.1-201ENST00000605160 304 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AP000676.4-201ENST00000624659 623 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 ADAM24P-201ENST00000398655 2101 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 RPL23P2-201ENST00000320371 421 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 OR4G2P-201ENST00000328113 903 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 RNU6-227P-201ENST00000362865 103 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AL390774.1-201ENST00000411924 246 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 OR4K6P-201ENST00000416478 897 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 FCF1P1-201ENST00000432690 571 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AL359265.2-201ENST00000434367 631 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 OR4C10P-201ENST00000434991 931 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 RNU6-956P-201ENST00000458868 103 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC090686.1-201ENST00000481577 749 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC106806.2-201ENST00000509365 500 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 RNU4-18P-201ENST00000516751 149 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC022634.1-201ENST00000520765 532 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC006518.2-201ENST00000542513 940 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AL442163.2-201ENST00000553912 710 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC234772.3-201ENST00000602277 528 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC020765.1-201ENST00000604296 328 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 AC026951.2-201ENST00000613847 241 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 MAPK10-365ENST00000641902 3825 ntBASIC1.8□□□□□ -2.12
HMCN1Q96RW7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HMCN1Q96RW7 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC145138.1-201ENST00000512908 2851 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms