Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC010132.2-201ENST00000295493 1043 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 RNU1-94P-201ENST00000362627 173 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 MIR298-201ENST00000401212 88 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 FAR2P2-201ENST00000413041 594 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC119751.6-201ENST00000416712 186 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 FAR2P4-202ENST00000425399 584 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC005154.2-201ENST00000438110 379 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 RPL36AP15-201ENST00000444514 266 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 RPS27AP15-201ENST00000447672 466 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC108463.1-201ENST00000450258 347 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 RPS5P7-201ENST00000456664 608 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC012158.1-204ENST00000483430 465 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC134698.5-201ENST00000519444 336 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC022882.1-201ENST00000532142 501 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC100770.1-201ENST00000532310 322 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 OR5AN2P-201ENST00000534535 896 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 HMGB2P1-201ENST00000591146 634 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 MIR7703-201ENST00000620784 77 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AP000346.3-201ENST00000622821 210 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC135352.1-201ENST00000506173 1418 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 AC104118.1-201ENST00000607625 1589 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 OR51H2P-202ENST00000641424 3046 ntBASIC4.67□□□□□ -1.66
C9orf72Q96LT7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 RNA5SP505-201ENST00000364748 108 ntBASIC4.67□□□□□ -1.66
C9orf72Q96LT7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 SNORA68.2-201ENST00000391263 128 ntBASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AL359265.2-201ENST00000434367 631 ntBASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AC097523.2-201ENST00000435551 652 ntBASIC4.67□□□□□ -1.66
C9orf72Q96LT7 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 HMGB3P9-201ENST00000441799 583 ntBASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AL935212.3-201ENST00000450729 284 ntBASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AC017007.3-201ENST00000479865 435 ntBASIC4.67□□□□□ -1.66
C9orf72Q96LT7 RPL23AP72-201ENST00000492447 435 ntBASIC4.67□□□□□ -1.66
C9orf72Q96LT7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AC098799.3-201ENST00000506095 438 ntBASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 RNA5SP360-201ENST00000516555 118 ntBASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
C9orf72Q96LT7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 AL139039.2-201ENST00000407436 479 ntBASIC4.66□□□□□ -1.66
C9orf72Q96LT7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 AC096644.3-201ENST00000416788 338 ntBASIC4.66□□□□□ -1.66
C9orf72Q96LT7 AC092570.3-201ENST00000420113 693 ntBASIC4.66□□□□□ -1.66
C9orf72Q96LT7 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 ISCUP1-201ENST00000454451 448 ntBASIC4.66□□□□□ -1.66
C9orf72Q96LT7 NDUFA12P1-201ENST00000455914 406 ntBASIC4.66□□□□□ -1.66
C9orf72Q96LT7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 AC090151.1-201ENST00000520784 730 ntBASIC4.66□□□□□ -1.66
C9orf72Q96LT7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.66□□□□□ -1.66
C9orf72Q96LT7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms