Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 RNU6-224P-201ENST00000384055 107 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 RNU6-452P-201ENST00000384406 107 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 NPM1P4-201ENST00000414095 812 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 RPS7P9-201ENST00000414704 586 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 AL513175.2-201ENST00000422071 443 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 AL133173.1-201ENST00000423458 397 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 MTCO1P52-201ENST00000433928 531 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 NDUFB4P8-201ENST00000435351 367 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 NANOGP2-201ENST00000435391 727 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 MRPL35P2-201ENST00000448009 511 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 AL589880.1-201ENST00000448271 287 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 PSAT1P4-201ENST00000466500 526 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC100832.1-201ENST00000471945 383 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 RN7SL177P-201ENST00000476596 299 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 AP000563.1-201ENST00000490865 758 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC139365.2-201ENST00000517972 253 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC004825.1-201ENST00000555068 586 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 MTND3P13-201ENST00000574391 343 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 H3F3BP2-201ENST00000583907 357 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 AL139344.1-201ENST00000605228 195 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 MIR8080-201ENST00000622224 89 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC024023.1-201ENST00000624530 922 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC119674.1-212ENST00000641155 993 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC000374.1-201ENST00000434698 1745 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC083843.3-201ENST00000623679 2186 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS50Q96JG6 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AL121950.1-201ENST00000624993 2077 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC011447.7-201ENST00000624228 1590 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS50Q96JG6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS50Q96JG6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS50Q96JG6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 RNU6-636P-201ENST00000384598 107 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 ATP5F1P2-201ENST00000398143 760 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC013404.1-201ENST00000413068 249 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC107081.1-201ENST00000414975 361 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 SETP8-201ENST00000435341 628 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC073052.1-201ENST00000440417 714 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 RPL34P26-201ENST00000445636 354 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 RPL7L1P1-201ENST00000448259 785 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 RPL7P32-201ENST00000457119 744 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 RNU7-140P-201ENST00000459546 60 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC005410.1-202ENST00000460347 485 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AP000942.1-201ENST00000463969 747 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC023050.1-201ENST00000498198 304 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC021193.1-201ENST00000511607 420 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms