Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 IGKV7-3-201ENST00000357453 298 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 HSPD1P16-201ENST00000402302 394 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 ATP5F1P6-201ENST00000402768 767 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AL606495.1-201ENST00000422100 813 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AL512661.1-201ENST00000434586 1253 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 AL353093.1-201ENST00000441292 436 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 ARL4AP3-201ENST00000441452 574 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 MRPL48P1-201ENST00000445390 636 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC004980.3-201ENST00000447046 365 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC092685.1-201ENST00000447960 1243 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AL162388.1-201ENST00000450912 352 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 RN7SL466P-201ENST00000497546 295 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC097173.1-201ENST00000505862 819 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC021146.3-201ENST00000511911 260 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 UBTFL9-201ENST00000534504 1148 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC116553.2-201ENST00000564203 463 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AL158211.2-201ENST00000607282 395 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC090948.2-201ENST00000607363 564 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 uc_338.18-201ENST00000615451 175 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 AC083865.1-201ENST00000636634 831 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.41□□□□□ -1.7
RFT1Q96AA3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFT1Q96AA3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
RFT1Q96AA3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.4□□□□□ -1.7
RFT1Q96AA3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
RFT1Q96AA3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.4□□□□□ -1.7
RFT1Q96AA3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RFT1Q96AA3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RFT1Q96AA3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RFT1Q96AA3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.4□□□□□ -1.71
RFT1Q96AA3 AC011155.1-201ENST00000316512 456 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
RFT1Q96AA3 U3.3-201ENST00000362986 216 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RFT1Q96AA3 AL121834.1-202ENST00000404494 277 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 AL512422.1-201ENST00000407033 553 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 MIR1282-201ENST00000408865 101 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.4□□□□□ -1.71
RFT1Q96AA3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.4□□□□□ -1.71
RFT1Q96AA3 UBE2V1P11-201ENST00000411559 285 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFT1Q96AA3 RPL35AP24-201ENST00000413846 330 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 TCEA1P4-201ENST00000415066 844 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 RPS24P8-201ENST00000431490 402 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 RPS20P1-201ENST00000434853 354 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.4□□□□□ -1.71
RFT1Q96AA3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.4□□□□□ -1.71
RFT1Q96AA3 AP000949.1-201ENST00000438328 629 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 RPS26P2-201ENST00000440331 348 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 RPS26P41-201ENST00000450370 284 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 CYCSP42-201ENST00000450823 238 ntBASIC4.4□□□□□ -1.71
RFT1Q96AA3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.4□□□□□ -1.71
RFT1Q96AA3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.4□□□□□ -1.71
RFT1Q96AA3 FGF7P3-201ENST00000454645 303 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms