Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 RNU1-87P-201ENST00000363727 170 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 RN7SKP124-201ENST00000364730 341 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 RNA5SP339-201ENST00000390987 122 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 RNU6-244P-201ENST00000391028 104 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AL035079.1-201ENST00000405210 287 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AL390316.1-201ENST00000406279 553 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 HMGB3P18-201ENST00000406327 590 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC090960.1-201ENST00000421072 306 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 MTND4P32-201ENST00000437189 1237 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AL008629.1-201ENST00000438615 184 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 RPL12P11-201ENST00000439970 501 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 RPL34P26-201ENST00000445636 354 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 YWHAEP1-201ENST00000453697 763 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 ATG12P2-201ENST00000456830 416 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 MTCO1P47-201ENST00000523889 1271 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC109635.6-201ENST00000525487 1113 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC015688.2-201ENST00000584523 262 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 Z99497.2-201ENST00000603634 310 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AL133507.1-201ENST00000605269 557 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC245008.1-201ENST00000608123 476 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AL360219.1-201ENST00000610230 366 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC024257.5-201ENST00000612739 531 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC009318.3-201ENST00000616916 503 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC131159.1-201ENST00000621854 213 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 MIR1910-201ENST00000636955 80 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 SAMMSON-227ENST00000642114 1199 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC120338.1-201ENST00000625074 1541 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 AC092747.4-201ENST00000620519 1861 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 OR55B1P-203ENST00000641518 2602 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AL031595.2-201ENST00000624215 19071 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 TMSB4XP4-201ENST00000323496 618 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 RNU1-74P-201ENST00000384108 171 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 RNU6-549P-201ENST00000384433 107 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 SFR1P1-201ENST00000403720 688 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AL356131.1-201ENST00000405826 414 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AP000357.1-201ENST00000409926 1165 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 VTA1P1-201ENST00000414044 866 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 TAF13P2-201ENST00000416876 286 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 Z75741.2-201ENST00000417272 1167 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 BX119904.4-201ENST00000424402 301 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 RAC1P8-201ENST00000427086 527 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC092170.1-201ENST00000440211 356 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 AC093890.1-201ENST00000502554 540 ntBASIC5.36□□□□□ -1.55
ATG4AQ8WYN0 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms