Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 PRRG3-202ENST00000370354 650 ntTSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 TMEM254-203ENST00000372275 860 ntTSL 2 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 C10orf53-201ENST00000374111 799 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 NCR3-203ENST00000376072 875 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 Y_RNA.436-201ENST00000384097 102 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 MRPL52-204ENST00000397505 333 ntTSL 5 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 IGLV8OR8-1-201ENST00000399730 352 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 MIR935-201ENST00000401179 91 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 OTX2-202ENST00000408990 1082 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 RNA5SP104-201ENST00000410989 118 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 OR13D3P-201ENST00000412501 937 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AL122008.2-201ENST00000412915 570 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 CYP46A4P-201ENST00000414953 267 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC007036.2-201ENST00000415934 437 ntTSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 MTND3P17-201ENST00000416968 344 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 MORF4L1P6-201ENST00000418771 268 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 SUPT4H1P1-201ENST00000423067 340 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 MCCD1P2-201ENST00000423228 335 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 TRMT112P4-201ENST00000429016 379 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 GPR143P-201ENST00000434155 205 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AL451050.1-201ENST00000450126 415 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 HMGB3P22-202ENST00000451823 572 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 HGF-208ENST00000453411 1111 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC117482.1-201ENST00000490933 911 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC026826.1-201ENST00000493002 361 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 SUDS3P1-201ENST00000505831 966 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 FBXL2-221ENST00000507198 1259 ntTSL 2 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 IGLCOR22-1-201ENST00000523725 316 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC109322.1-201ENST00000524499 1264 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AP003392.2-201ENST00000527269 208 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AP000867.2-201ENST00000532468 320 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 NEDD8-MDP1-202ENST00000534348 595 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 EIF4A1P4-201ENST00000550578 1213 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AMZ2P1-203ENST00000565833 850 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC009060.2-201ENST00000569264 106 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC239859.4-201ENST00000582255 675 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC098848.2-201ENST00000588023 330 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC087683.1-201ENST00000591187 441 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 HKR1-222ENST00000591417 525 ntTSL 4 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC007363.1-201ENST00000604736 620 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AP006545.2-201ENST00000607091 461 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC064807.4-201ENST00000607201 407 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC007216.5-201ENST00000612457 109 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 STRADA-224ENST00000617949 705 ntTSL 2 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC138932.4-201ENST00000619102 109 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC068831.8-201ENST00000620171 435 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC138969.4-201ENST00000620593 109 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AP003122.6-201ENST00000623831 495 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AL683826.1-201ENST00000624104 627 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AL357562.1-201ENST00000624911 609 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AP000590.1-201ENST00000624943 464 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 AC079781.4-201ENST00000641908 219 ntBASIC3.95□□□□□ -1.78
SVIPQ8NHG7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SVIPQ8NHG7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SVIPQ8NHG7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SVIPQ8NHG7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
SVIPQ8NHG7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SVIPQ8NHG7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC3.94□□□□□ -1.78
SVIPQ8NHG7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
SVIPQ8NHG7 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SVIPQ8NHG7 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SVIPQ8NHG7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms