Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AC008083.2-201ENST00000546707 476 ntBASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AC011611.5-201ENST00000552477 578 ntBASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 RN7SL290P-201ENST00000578661 300 ntBASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AL022067.1-201ENST00000602426 454 ntBASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AC093673.2-201ENST00000609674 331 ntBASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AL034549.2-201ENST00000618285 3373 ntBASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AC022079.2-201ENST00000619739 566 ntBASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AC090506.2-201ENST00000624521 419 ntBASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
BEST3Q8N1M1 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 CASC19-284ENST00000642142 1868 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 ZNF849P-201ENST00000594711 1566 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 MIR589-201ENST00000385238 99 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC233289.1-201ENST00000403700 508 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 RN7SKP114-201ENST00000410327 279 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 CTSL3P-202ENST00000412179 788 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 NPM1P40-201ENST00000412758 733 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AL139128.1-201ENST00000413921 941 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 NOP56P2-201ENST00000447491 769 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC091685.2-201ENST00000454924 864 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 GTF2IP12-201ENST00000456547 356 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 IMPA1P1-201ENST00000510718 842 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 RNU6-513P-201ENST00000516104 104 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 MTND2P32-201ENST00000521584 1038 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 OR5AZ1P-201ENST00000527448 943 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 OR5AK3P-201ENST00000527486 1297 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 EIF4A2P5-201ENST00000529914 499 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 NPM1P35-201ENST00000533043 868 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC068993.1-201ENST00000546724 589 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 MIR4691-201ENST00000583764 85 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 RN7SL622P-201ENST00000585292 275 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC011626.1-201ENST00000604710 562 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC063944.3-201ENST00000609969 533 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC100827.5-201ENST00000615883 426 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC091932.2-201ENST00000623014 291 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC091905.4-201ENST00000623432 202 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC009452.1-201ENST00000640823 606 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 INTS6P1-201ENST00000504674 2530 ntBASIC4.75□□□□□ -1.65
BEST3Q8N1M1 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BEST3Q8N1M1 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms