Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 SKP1P1-201ENST00000438081 489 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC092809.1-201ENST00000441469 474 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC092601.1-201ENST00000444526 383 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AL445991.1-201ENST00000450381 475 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 ACTR3P3-201ENST00000480448 893 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 RPS26P24-201ENST00000497656 331 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 IGKV1D-22-201ENST00000518953 324 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 IGKV2D-10-201ENST00000520194 281 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC093519.1-201ENST00000566109 298 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 ZNF322P1-201ENST00000568013 1209 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 MIR744-201ENST00000578242 98 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 MIR212-201ENST00000586026 110 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC091193.1-201ENST00000604640 448 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC010338.1-201ENST00000621823 717 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC116563.2-201ENST00000624751 535 ntBASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
UBE3DQ7Z6J8 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC022034.1-201ENST00000512867 2156 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 ZNF658B-201ENST00000602828 3408 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 SNORA63-201ENST00000363450 132 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AF228730.4-201ENST00000421457 183 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AL139184.1-202ENST00000422303 222 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AL157884.1-201ENST00000424561 454 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 RPEP4-201ENST00000437636 602 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 PMCHL2-203ENST00000457791 237 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 OR7E99P-201ENST00000505750 922 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC018710.1-201ENST00000506509 158 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AF131216.2-201ENST00000512316 564 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 RNU6-583P-201ENST00000516012 92 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AP003034.1-201ENST00000534621 422 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC009977.1-201ENST00000586015 570 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC005498.1-201ENST00000592125 465 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC011497.2-201ENST00000600255 639 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AL683813.2-201ENST00000605245 502 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AC090525.3-201ENST00000605601 189 ntBASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.09□□□□□ -1.43
UBE3DQ7Z6J8 AL008723.3-201ENST00000608926 449 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms