Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS13CQ709C8 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS13CQ709C8 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS13CQ709C8 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS13CQ709C8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS13CQ709C8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS13CQ709C8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 AC010487.1-201ENST00000594408 1172 ntBASIC3.46□□□□□ -1.86
VPS13CQ709C8 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 AC010329.1-201ENST00000593903 8328 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 AC017083.1-201ENST00000428093 483 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 SERPINA7P1-201ENST00000443077 631 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 CAB39P1-201ENST00000502277 460 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 AP001002.1-201ENST00000625148 1513 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 ZNF402P-201ENST00000404435 3100 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 MYL12BP2-201ENST00000503948 512 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 HPRT1P2-201ENST00000505250 544 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 AC120057.2-201ENST00000571520 271 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 AL731532.2-201ENST00000623542 1953 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 RNU1-83P-201ENST00000363426 164 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 AC007738.1-201ENST00000413892 348 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 RPS29P2-201ENST00000479278 136 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 NPM1P21-201ENST00000513394 762 ntBASIC3.45□□□□□ -1.86
VPS13CQ709C8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS13CQ709C8 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS13CQ709C8 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS13CQ709C8 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS13CQ709C8 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS13CQ709C8 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS13CQ709C8 AL390879.2-203ENST00000426943 1121 ntBASIC3.44□□□□□ -1.86
VPS13CQ709C8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 ELOCP35-201ENST00000604289 336 ntBASIC3.44□□□□□ -1.86
VPS13CQ709C8 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS13CQ709C8 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS13CQ709C8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS13CQ709C8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS13CQ709C8 MIR200C-201ENST00000384980 68 ntBASIC3.44□□□□□ -1.86
VPS13CQ709C8 CEACAMP1-201ENST00000434624 1035 ntBASIC3.44□□□□□ -1.86
VPS13CQ709C8 RN7SKP157-201ENST00000516174 282 ntBASIC3.44□□□□□ -1.86
VPS13CQ709C8 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 AC015914.2-201ENST00000618167 288 ntBASIC3.44□□□□□ -1.86
VPS13CQ709C8 AC055839.1-201ENST00000634467 498 ntBASIC3.44□□□□□ -1.86
VPS13CQ709C8 AL034408.1-202ENST00000636088 415 ntBASIC3.44□□□□□ -1.86
VPS13CQ709C8 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS13CQ709C8 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
VPS13CQ709C8 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS13CQ709C8 AP000756.2-201ENST00000624168 2567 ntBASIC3.44□□□□□ -1.86
VPS13CQ709C8 RN7SKP182-201ENST00000410772 298 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 AL157385.1-201ENST00000446973 268 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 MTND6P5-201ENST00000448266 512 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 RPL23AP37-201ENST00000479658 549 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 MIR5187-201ENST00000583479 76 ntBASIC3.43□□□□□ -1.86
VPS13CQ709C8 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS13CQ709C8 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms