Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AC011155.1-201ENST00000316512 456 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AC019155.1-201ENST00000382242 574 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 RNU1-82P-201ENST00000390851 165 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AL590762.2-201ENST00000395798 571 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 EIF4A1P3-201ENST00000411521 244 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 RPL6P29-201ENST00000414863 865 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AC069213.2-201ENST00000420238 366 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AC099336.2-201ENST00000422457 254 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 RPL23AP1-201ENST00000428990 471 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AL353597.2-202ENST00000434901 373 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 H2AFZP5-201ENST00000446960 382 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 BTF3P6-201ENST00000448054 499 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 CYCSP42-201ENST00000450823 238 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AC099560.2-201ENST00000457554 255 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 snoU13.1-201ENST00000459157 104 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 OR52A4P-201ENST00000472867 958 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 RN7SL860P-201ENST00000473738 223 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 UBA52P3-201ENST00000491303 382 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AK3P4-201ENST00000504283 583 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AC111000.3-201ENST00000508057 576 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 RAB9BP1-201ENST00000519581 626 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AC005868.1-201ENST00000536421 331 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AC012213.4-201ENST00000606457 354 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AC012414.7-202ENST00000622705 1090 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 OR51C1P-202ENST00000641159 1444 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 KARSP3-201ENST00000571212 1504 ntBASIC4.36□□□□□ -1.71
H3F3CQ6NXT2 AC139713.2-215ENST00000641428 5037 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 LINC01109-201ENST00000603837 3081 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 DDX18P4-201ENST00000511690 1966 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AC016397.1-201ENST00000412463 242 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AC073136.2-201ENST00000417282 849 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 CYCSP10-201ENST00000417973 294 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 EIF4A1P1-201ENST00000420241 934 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 CNOT7P1-201ENST00000429006 852 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AL162591.2-201ENST00000449634 317 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AC108463.1-201ENST00000450258 347 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AC079168.2-201ENST00000453977 416 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 NIP7P2-201ENST00000485801 544 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AC093720.1-201ENST00000505681 714 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 C1GALT1P3-201ENST00000522049 819 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 NPM1P35-201ENST00000533043 868 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AC087888.1-201ENST00000550884 1254 ntBASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.35□□□□□ -1.71
H3F3CQ6NXT2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms