Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 AC107027.3-201ENST00000565095 3473 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 AC090017.1-201ENST00000548612 1779 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 LINC01355-201ENST00000566551 5444 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 TMSB4XP4-201ENST00000323496 618 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 RNU4-2-201ENST00000365668 141 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 VDAC2P1-201ENST00000399358 958 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 SNORA11C-201ENST00000408532 129 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 BMS1P17-202ENST00000416720 316 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 NPM1P24-201ENST00000428039 894 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 AL390119.1-201ENST00000440329 312 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 YWHAQP9-201ENST00000445891 512 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 RPS27AP2-201ENST00000457576 465 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 AC092754.1-201ENST00000472975 479 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 RPL23AP37-201ENST00000479658 549 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 RN7SL273P-201ENST00000481561 299 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC38Q502W7 AC096571.1-202ENST00000506634 735 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC38Q502W7 MTND6P2-201ENST00000512226 524 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 SNORA19.3-201ENST00000516165 130 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 RNU6-1028P-201ENST00000517164 93 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 HMGB1P23-201ENST00000518743 568 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 MIR4509-3-201ENST00000578671 94 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 RN7SL753P-201ENST00000581238 290 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 MIR4509-2-201ENST00000583920 94 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 BNIP3P4-201ENST00000604946 565 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 AL355816.1-201ENST00000607951 118 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 MIR4509-1-201ENST00000618224 94 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 MIR6839-201ENST00000620425 113 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC38Q502W7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC38Q502W7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC38Q502W7 AC000123.3-201ENST00000624029 4975 ntBASIC5.47□□□□□ -1.53
CCDC38Q502W7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC38Q502W7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC38Q502W7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC38Q502W7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
CCDC38Q502W7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC38Q502W7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC38Q502W7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC38Q502W7 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AL929288.2-201ENST00000446368 407 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AL606517.1-201ENST00000446914 387 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC005002.1-201ENST00000447458 540 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 YWHAEP1-201ENST00000453697 763 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AL035090.1-201ENST00000454835 332 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC022133.1-201ENST00000490961 571 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC023050.1-201ENST00000498198 304 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 HPRT1P1-201ENST00000509498 657 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC074087.1-201ENST00000512059 724 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 IGKV3D-34-201ENST00000522638 302 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC104417.1-201ENST00000523974 751 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 OR8I1P-201ENST00000529291 931 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AP004607.2-201ENST00000533949 322 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 CYP2C60P-201ENST00000566088 139 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC012146.2-201ENST00000576545 416 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC115085.1-201ENST00000588924 229 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 VN1R88P-201ENST00000596787 292 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC009027.1-201ENST00000604510 479 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms