Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 OR10G5P-201ENST00000532733 358 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.29□□□□□ -1.56
HDAC4P56524 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.29□□□□□ -1.56
HDAC4P56524 AC011447.4-201ENST00000587562 111 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 AC096947.1-201ENST00000603233 470 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.29□□□□□ -1.56
HDAC4P56524 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.29□□□□□ -1.56
HDAC4P56524 AC119674.1-212ENST00000641155 993 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
HDAC4P56524 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.29□□□□□ -1.56
HDAC4P56524 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.29□□□□□ -1.56
HDAC4P56524 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.29□□□□□ -1.56
HDAC4P56524 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 AC114947.2-201ENST00000565748 2125 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.29□□□□□ -1.56
HDAC4P56524 AC000374.1-201ENST00000434698 1745 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC4P56524 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC4P56524 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
HDAC4P56524 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC4P56524 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.28□□□□□ -1.56
HDAC4P56524 SNURFL-201ENST00000309296 343 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HDAC4P56524 U8.4-201ENST00000363626 134 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 RNU1-106P-201ENST00000384382 164 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 MIR122-201ENST00000385044 85 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 HMGB1P10-201ENST00000395823 563 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 SNORA77-201ENST00000408716 125 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 RPL37P18-201ENST00000411602 243 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC4P56524 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.28□□□□□ -1.56
HDAC4P56524 HMGB3P9-201ENST00000441799 583 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 RPL34P20-201ENST00000442771 351 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 EEF1B2P5-201ENST00000444820 548 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 CASP3P1-201ENST00000446037 609 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 AL096829.2-201ENST00000446582 742 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.28□□□□□ -1.56
HDAC4P56524 RPL7P55-201ENST00000450522 746 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 AC091180.1-201ENST00000462104 372 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.28□□□□□ -1.56
HDAC4P56524 RN7SL329P-201ENST00000467740 299 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC4P56524 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC4P56524 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.28□□□□□ -1.56
HDAC4P56524 AC121161.1-201ENST00000510606 652 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC4P56524 AC110760.3-202ENST00000515177 371 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 AP003355.1-201ENST00000518956 587 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC4P56524 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC4P56524 HIGD1AP5-201ENST00000529959 259 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 AC006349.1-201ENST00000555526 235 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC4P56524 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.28□□□□□ -1.56
HDAC4P56524 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC4P56524 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.28□□□□□ -1.56
HDAC4P56524 AC034229.4-201ENST00000607861 441 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC4P56524 AL627230.1-201ENST00000613077 211 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 AL591926.8-201ENST00000616876 211 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC4P56524 AC010608.3-201ENST00000625048 527 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 LINC01739-205ENST00000641890 573 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 AC063976.2-201ENST00000425667 3556 ntBASIC5.28□□□□□ -1.56
HDAC4P56524 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.28□□□□□ -1.56
HDAC4P56524 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC4P56524 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC4P56524 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC4P56524 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC4P56524 AC109780.1-201ENST00000451768 1344 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HDAC4P56524 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HDAC4P56524 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC4P56524 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC4P56524 RNU6-532P-201ENST00000384318 107 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 SNORA68.2-201ENST00000391263 128 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC4P56524 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 RNU2-17P-201ENST00000410290 190 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 RN7SKP222-201ENST00000410651 315 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 DPPA2P3-201ENST00000411853 655 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.27□□□□□ -1.57
HDAC4P56524 C4BPAP1-201ENST00000415474 1893 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms