Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH13P55290 RGS17P1-201ENST00000423358 553 ntBASIC4.8□□□□□ -1.64
CDH13P55290 CHEK2P5-201ENST00000423877 246 ntBASIC4.8□□□□□ -1.64
CDH13P55290 EIF4HP2-201ENST00000424380 563 ntBASIC4.8□□□□□ -1.64
CDH13P55290 AC092162.1-201ENST00000432828 434 ntBASIC4.8□□□□□ -1.64
CDH13P55290 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH13P55290 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH13P55290 RHEBP2-201ENST00000450289 600 ntBASIC4.8□□□□□ -1.64
CDH13P55290 AL606490.1-201ENST00000452266 765 ntBASIC4.8□□□□□ -1.64
CDH13P55290 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH13P55290 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH13P55290 AL389915.2-201ENST00000454576 441 ntBASIC4.8□□□□□ -1.64
CDH13P55290 AP000942.1-201ENST00000463969 747 ntBASIC4.8□□□□□ -1.64
CDH13P55290 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH13P55290 AC072052.1-201ENST00000496556 306 ntBASIC4.8□□□□□ -1.64
CDH13P55290 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH13P55290 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH13P55290 RNA5SP43-201ENST00000516559 110 ntBASIC4.8□□□□□ -1.64
CDH13P55290 RN7SKP260-201ENST00000516907 149 ntBASIC4.8□□□□□ -1.64
CDH13P55290 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH13P55290 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH13P55290 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH13P55290 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH13P55290 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH13P55290 NMNAT1P1-201ENST00000554095 876 ntBASIC4.8□□□□□ -1.64
CDH13P55290 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH13P55290 AC087477.6-201ENST00000559595 843 ntBASIC4.8□□□□□ -1.64
CDH13P55290 AC068714.1-201ENST00000559623 800 ntBASIC4.8□□□□□ -1.64
CDH13P55290 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH13P55290 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH13P55290 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH13P55290 AC021851.1-201ENST00000608537 1082 ntBASIC4.8□□□□□ -1.64
CDH13P55290 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH13P55290 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH13P55290 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH13P55290 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH13P55290 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.8□□□□□ -1.64
CDH13P55290 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 AL672167.1-203ENST00000641299 2975 ntBASIC4.8□□□□□ -1.64
CDH13P55290 AC009313.2-201ENST00000417893 1941 ntBASIC4.8□□□□□ -1.64
CDH13P55290 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CDH13P55290 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CDH13P55290 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH13P55290 AC096656.1-201ENST00000623826 1364 ntBASIC4.79□□□□□ -1.64
CDH13P55290 DDX18P5-201ENST00000534547 1306 ntBASIC4.79□□□□□ -1.64
CDH13P55290 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH13P55290 AC008549.2-201ENST00000333482 706 ntBASIC4.79□□□□□ -1.64
CDH13P55290 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CDH13P55290 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CDH13P55290 RNU6-1005P-201ENST00000384519 107 ntBASIC4.79□□□□□ -1.64
CDH13P55290 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH13P55290 AL357515.1-201ENST00000402967 542 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH13P55290 AC008173.1-201ENST00000418901 264 ntBASIC4.79□□□□□ -1.64
CDH13P55290 CKS1BP6-201ENST00000424932 240 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH13P55290 ETF1P3-201ENST00000430422 1160 ntBASIC4.79□□□□□ -1.64
CDH13P55290 RPS24P8-201ENST00000431490 402 ntBASIC4.79□□□□□ -1.64
CDH13P55290 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH13P55290 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH13P55290 RHOT1P3-201ENST00000436571 331 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH13P55290 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.79□□□□□ -1.64
CDH13P55290 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH13P55290 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH13P55290 RPL10P17-201ENST00000453852 316 ntBASIC4.79□□□□□ -1.64
CDH13P55290 MTND2P39-201ENST00000457230 764 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH13P55290 AC110749.1-201ENST00000462007 357 ntBASIC4.79□□□□□ -1.64
CDH13P55290 RN7SL517P-201ENST00000462240 305 ntBASIC4.79□□□□□ -1.64
CDH13P55290 RPL23AP12-201ENST00000467573 473 ntBASIC4.79□□□□□ -1.64
CDH13P55290 RN7SL244P-201ENST00000493405 297 ntBASIC4.79□□□□□ -1.64
CDH13P55290 RN7SL101P-201ENST00000496350 279 ntBASIC4.79□□□□□ -1.64
CDH13P55290 OR5H3P-201ENST00000502817 919 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AC111193.1-201ENST00000504097 155 ntBASIC4.79□□□□□ -1.64
CDH13P55290 MTND3P3-201ENST00000505004 126 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH13P55290 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AP003102.1-201ENST00000525638 661 ntBASIC4.79□□□□□ -1.64
CDH13P55290 OR7E128P-201ENST00000532736 1024 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AP000916.1-201ENST00000533869 835 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH13P55290 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH13P55290 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH13P55290 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH13P55290 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH13P55290 AC012146.2-201ENST00000576545 416 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AC006116.7-201ENST00000590141 756 ntBASIC4.79□□□□□ -1.64
CDH13P55290 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH13P55290 AC005377.1-201ENST00000605126 456 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms