Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 C1DP1-201ENST00000426049 402 ntBASIC4.8□□□□□ -1.64
CDH12P55289 NANOGP4-201ENST00000427230 913 ntBASIC4.8□□□□□ -1.64
CDH12P55289 CACYBPP1-201ENST00000438592 684 ntBASIC4.8□□□□□ -1.64
CDH12P55289 AL138899.2-201ENST00000439139 499 ntBASIC4.8□□□□□ -1.64
CDH12P55289 AL589880.1-201ENST00000448271 287 ntBASIC4.8□□□□□ -1.64
CDH12P55289 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH12P55289 RPS27AP2-201ENST00000457576 465 ntBASIC4.8□□□□□ -1.64
CDH12P55289 RPS4XP12-201ENST00000461747 709 ntBASIC4.8□□□□□ -1.64
CDH12P55289 AC110749.1-201ENST00000462007 357 ntBASIC4.8□□□□□ -1.64
CDH12P55289 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH12P55289 RPL7P40-201ENST00000481703 745 ntBASIC4.8□□□□□ -1.64
CDH12P55289 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH12P55289 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CDH12P55289 AC023050.1-201ENST00000498198 304 ntBASIC4.8□□□□□ -1.64
CDH12P55289 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH12P55289 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH12P55289 AC119751.1-201ENST00000513357 765 ntBASIC4.8□□□□□ -1.64
CDH12P55289 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH12P55289 AC105031.1-201ENST00000518550 476 ntBASIC4.8□□□□□ -1.64
CDH12P55289 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH12P55289 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH12P55289 OR8A2P-201ENST00000528631 952 ntBASIC4.8□□□□□ -1.64
CDH12P55289 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH12P55289 AC027544.3-201ENST00000535082 757 ntBASIC4.8□□□□□ -1.64
CDH12P55289 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CDH12P55289 AC022404.1-201ENST00000555320 273 ntBASIC4.8□□□□□ -1.64
CDH12P55289 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH12P55289 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH12P55289 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH12P55289 SS18L2P2-201ENST00000583960 235 ntBASIC4.8□□□□□ -1.64
CDH12P55289 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CDH12P55289 AC004223.2-201ENST00000590309 544 ntBASIC4.8□□□□□ -1.64
CDH12P55289 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH12P55289 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH12P55289 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH12P55289 AC008536.1-201ENST00000602872 669 ntBASIC4.8□□□□□ -1.64
CDH12P55289 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH12P55289 AC018695.5-201ENST00000605872 315 ntBASIC4.8□□□□□ -1.64
CDH12P55289 AC108359.1-201ENST00000616451 1211 ntBASIC4.8□□□□□ -1.64
CDH12P55289 MIR8080-201ENST00000622224 89 ntBASIC4.8□□□□□ -1.64
CDH12P55289 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.8□□□□□ -1.64
CDH12P55289 AP003485.2-201ENST00000623636 610 ntBASIC4.8□□□□□ -1.64
CDH12P55289 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH12P55289 AL121594.5-201ENST00000631724 573 ntBASIC4.8□□□□□ -1.64
CDH12P55289 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CDH12P55289 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH12P55289 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH12P55289 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH12P55289 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CDH12P55289 AL022393.1-201ENST00000625142 1677 ntBASIC4.8□□□□□ -1.64
CDH12P55289 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH12P55289 AP000542.2-201ENST00000623199 6179 ntBASIC4.79□□□□□ -1.64
CDH12P55289 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH12P55289 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CDH12P55289 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CDH12P55289 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH12P55289 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CDH12P55289 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH12P55289 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH12P55289 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH12P55289 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH12P55289 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CDH12P55289 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CDH12P55289 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CDH12P55289 ANKRD36P1-201ENST00000344424 659 ntBASIC4.79□□□□□ -1.64
CDH12P55289 RNU4-51P-201ENST00000364206 140 ntBASIC4.79□□□□□ -1.64
CDH12P55289 RNU6-224P-201ENST00000384055 107 ntBASIC4.79□□□□□ -1.64
CDH12P55289 RNU1-74P-201ENST00000384108 171 ntBASIC4.79□□□□□ -1.64
CDH12P55289 MIR137-201ENST00000385223 102 ntBASIC4.79□□□□□ -1.64
CDH12P55289 MTCO1P56-201ENST00000401674 224 ntBASIC4.79□□□□□ -1.64
CDH12P55289 U3.32-201ENST00000408116 212 ntBASIC4.79□□□□□ -1.64
CDH12P55289 AC107081.1-201ENST00000414975 361 ntBASIC4.79□□□□□ -1.64
CDH12P55289 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.79□□□□□ -1.64
CDH12P55289 AL513175.2-201ENST00000422071 443 ntBASIC4.79□□□□□ -1.64
CDH12P55289 OR5M12P-201ENST00000423388 929 ntBASIC4.79□□□□□ -1.64
CDH12P55289 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH12P55289 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.79□□□□□ -1.64
CDH12P55289 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH12P55289 RPS29P14-201ENST00000431518 171 ntBASIC4.79□□□□□ -1.64
CDH12P55289 RPL35AP21-201ENST00000437667 333 ntBASIC4.79□□□□□ -1.64
CDH12P55289 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 AC073052.1-201ENST00000440417 714 ntBASIC4.79□□□□□ -1.64
CDH12P55289 AL353093.1-201ENST00000441292 436 ntBASIC4.79□□□□□ -1.64
CDH12P55289 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 RPS6P2-201ENST00000454208 705 ntBASIC4.79□□□□□ -1.64
CDH12P55289 VN1R40P-201ENST00000455196 941 ntBASIC4.79□□□□□ -1.64
CDH12P55289 RNU7-140P-201ENST00000459546 60 ntBASIC4.79□□□□□ -1.64
CDH12P55289 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH12P55289 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH12P55289 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.79□□□□□ -1.64
CDH12P55289 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.79□□□□□ -1.64
CDH12P55289 RNA5SP373-201ENST00000517271 95 ntBASIC4.79□□□□□ -1.64
CDH12P55289 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms