Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.11□□□□□ -1.43
EPHB3P54753 AC083899.3-201ENST00000603413 594 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AC119501.1-201ENST00000603646 475 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AC097505.1-201ENST00000610199 565 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AL512624.1-201ENST00000613638 469 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AC008115.3-201ENST00000614874 549 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AC127502.3-201ENST00000636170 1206 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
EPHB3P54753 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
EPHB3P54753 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
EPHB3P54753 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
EPHB3P54753 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
EPHB3P54753 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
EPHB3P54753 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.11□□□□□ -1.43
EPHB3P54753 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
EPHB3P54753 AL121768.1-201ENST00000613917 2544 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.1□□□□□ -1.43
EPHB3P54753 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
EPHB3P54753 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.1□□□□□ -1.43
EPHB3P54753 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 AC005261.2-201ENST00000593427 4258 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
EPHB3P54753 MTND4P16-201ENST00000466108 1367 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
EPHB3P54753 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
EPHB3P54753 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
EPHB3P54753 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 AL121657.1-201ENST00000327215 531 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 FGF7P2-201ENST00000332473 296 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 Y_RNA.61-201ENST00000362835 102 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 RNA5SP132-201ENST00000364725 118 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 RPL7P8-201ENST00000411964 730 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 ATG4AP1-201ENST00000416893 538 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.1□□□□□ -1.43
EPHB3P54753 RAB9AP5-201ENST00000437794 597 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 RAB9AP2-201ENST00000443911 597 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 ST13P20-201ENST00000447996 1065 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 AC092001.1-201ENST00000453012 261 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 KATNBL1P6-201ENST00000453433 915 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 FRG2FP-204ENST00000453982 852 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.1□□□□□ -1.43
EPHB3P54753 RN7SL629P-201ENST00000489622 285 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 AC104971.1-201ENST00000495117 578 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.1□□□□□ -1.43
EPHB3P54753 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.1□□□□□ -1.43
EPHB3P54753 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 MIR2117-201ENST00000516780 80 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 AC021678.3-201ENST00000517893 476 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 AC025881.1-201ENST00000518851 512 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.1□□□□□ -1.43
EPHB3P54753 AC092709.1-201ENST00000521355 1045 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.1□□□□□ -1.43
EPHB3P54753 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.1□□□□□ -1.43
EPHB3P54753 AC004217.3-201ENST00000551552 878 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.1□□□□□ -1.43
EPHB3P54753 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.1□□□□□ -1.43
EPHB3P54753 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.1□□□□□ -1.43
EPHB3P54753 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.1□□□□□ -1.43
EPHB3P54753 AC008507.1-201ENST00000587506 734 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.1□□□□□ -1.43
EPHB3P54753 AC069545.1-201ENST00000605671 358 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 AC005021.1-201ENST00000608730 355 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 AL592148.2-201ENST00000612210 372 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 AC063943.3-201ENST00000615562 356 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 CU639417.4-201ENST00000623928 207 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.1□□□□□ -1.43
EPHB3P54753 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
EPHB3P54753 OLMALINC-203ENST00000641087 3779 ntBASIC6.1□□□□□ -1.43
EPHB3P54753 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.1□□□□□ -1.43
EPHB3P54753 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
EPHB3P54753 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
EPHB3P54753 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
EPHB3P54753 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB3P54753 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB3P54753 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.09□□□□□ -1.43
EPHB3P54753 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB3P54753 KYNUP3-201ENST00000574386 1341 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB3P54753 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB3P54753 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB3P54753 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB3P54753 RNU6-500P-201ENST00000362349 107 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 RNU6-931P-201ENST00000363850 107 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 GSTA12P-201ENST00000402398 508 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms