Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPL34P20-201ENST00000442771 351 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 RPL36AP15-201ENST00000444514 266 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.06□□□□□ -1.6
LIMK1P53667 CDH12P2-201ENST00000504393 298 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 AC025768.1-201ENST00000510057 267 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 AC100784.1-201ENST00000522790 310 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.06□□□□□ -1.6
LIMK1P53667 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.06□□□□□ -1.6
LIMK1P53667 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.06□□□□□ -1.6
LIMK1P53667 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.06□□□□□ -1.6
LIMK1P53667 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
LIMK1P53667 MIR3160-1-201ENST00000577972 85 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 RN7SL690P-201ENST00000582087 240 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 AP001521.2-201ENST00000608772 546 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.06□□□□□ -1.6
LIMK1P53667 AP003497.2-201ENST00000624220 967 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK1P53667 AC119674.1-212ENST00000641155 993 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK1P53667 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK1P53667 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.06□□□□□ -1.6
LIMK1P53667 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK1P53667 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LIMK1P53667 AC079097.1-201ENST00000512187 1399 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIMK1P53667 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
LIMK1P53667 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK1P53667 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIMK1P53667 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIMK1P53667 RAD1P1-201ENST00000231383 813 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK1P53667 RPSAP35-201ENST00000413753 818 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AL390879.2-203ENST00000426943 1121 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK1P53667 AC023512.1-201ENST00000444513 499 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 IGBP1P3-201ENST00000447449 1000 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK1P53667 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK1P53667 MTND2P30-201ENST00000456663 382 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AC010326.1-201ENST00000462726 602 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 RPL7AP28-201ENST00000464513 571 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LIMK1P53667 AC058823.1-201ENST00000485315 474 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AK3P4-201ENST00000504283 583 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.05□□□□□ -1.6
LIMK1P53667 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK1P53667 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.05□□□□□ -1.6
LIMK1P53667 HIGD1AP18-201ENST00000520730 278 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.05□□□□□ -1.6
LIMK1P53667 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK1P53667 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK1P53667 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.05□□□□□ -1.6
LIMK1P53667 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK1P53667 HMGB3P26-201ENST00000560051 582 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK1P53667 HNRNPCP4-201ENST00000571636 900 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 RN7SL290P-201ENST00000578661 300 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.05□□□□□ -1.6
LIMK1P53667 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
LIMK1P53667 AC011453.2-201ENST00000603737 729 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AC007423.1-201ENST00000605009 627 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AL109618.2-201ENST00000605527 211 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 RPL23AP61-201ENST00000623642 466 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK1P53667 MIR6830-201ENST00000636015 70 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.05□□□□□ -1.6
LIMK1P53667 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIMK1P53667 AL138820.1-201ENST00000617901 5305 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.05□□□□□ -1.6
LIMK1P53667 AL049555.1-201ENST00000562834 1933 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LIMK1P53667 VN2R3P-201ENST00000422626 1412 ntBASIC5.05□□□□□ -1.6
LIMK1P53667 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK1P53667 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LIMK1P53667 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIMK1P53667 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LIMK1P53667 AC100757.1-201ENST00000616872 1835 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.04□□□□□ -1.6
LIMK1P53667 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LIMK1P53667 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
LIMK1P53667 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LIMK1P53667 KARSP3-201ENST00000571212 1504 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LIMK1P53667 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.04□□□□□ -1.6
LIMK1P53667 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LIMK1P53667 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LIMK1P53667 MIR320B1-201ENST00000390209 79 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LIMK1P53667 SNORA48.7-201ENST00000391302 135 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 AL357078.2-201ENST00000416486 427 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 CHIAP3-201ENST00000423668 1133 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.04□□□□□ -1.6
LIMK1P53667 AC023141.6-201ENST00000429418 337 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 RPL7P11-201ENST00000437586 658 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.04□□□□□ -1.6
LIMK1P53667 RPS29P10-201ENST00000439197 166 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 AC073465.2-201ENST00000440938 498 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 GEMIN8P3-201ENST00000445417 720 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 EIF2S2P2-201ENST00000447161 982 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms