Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 MTCO1P45-201ENST00000431457 267 ntBASIC5.21□□□□□ -1.58
GPC3P51654 RPL34P6-201ENST00000432390 345 ntBASIC5.21□□□□□ -1.58
GPC3P51654 MTCYBP29-201ENST00000436327 1006 ntBASIC5.21□□□□□ -1.58
GPC3P51654 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.21□□□□□ -1.58
GPC3P51654 CYCSP42-201ENST00000450823 238 ntBASIC5.21□□□□□ -1.58
GPC3P51654 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.21□□□□□ -1.58
GPC3P51654 AK3P4-201ENST00000504283 583 ntBASIC5.21□□□□□ -1.58
GPC3P51654 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.21□□□□□ -1.58
GPC3P51654 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.21□□□□□ -1.58
GPC3P51654 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.21□□□□□ -1.58
GPC3P51654 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.21□□□□□ -1.58
GPC3P51654 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.21□□□□□ -1.58
GPC3P51654 AL023583.1-201ENST00000607518 1143 ntBASIC5.21□□□□□ -1.58
GPC3P51654 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.21□□□□□ -1.58
GPC3P51654 AL450326.2-201ENST00000421913 1962 ntBASIC5.21□□□□□ -1.58
GPC3P51654 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GPC3P51654 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.21□□□□□ -1.58
GPC3P51654 Z95327.2-201ENST00000414579 1873 ntBASIC5.21□□□□□ -1.58
GPC3P51654 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
GPC3P51654 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
GPC3P51654 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.21□□□□□ -1.58
GPC3P51654 BX005019.1-201ENST00000561881 1810 ntBASIC5.2□□□□□ -1.58
GPC3P51654 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC3P51654 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC3P51654 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC3P51654 ZFRP1-201ENST00000457579 2970 ntBASIC5.2□□□□□ -1.58
GPC3P51654 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.2□□□□□ -1.58
GPC3P51654 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
GPC3P51654 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GPC3P51654 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
GPC3P51654 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC3P51654 KARSP3-201ENST00000571212 1504 ntBASIC5.2□□□□□ -1.58
GPC3P51654 AC126755.2-208ENST00000327792 462 ntBASIC5.2□□□□□ -1.58
GPC3P51654 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
GPC3P51654 AC138969.1-213ENST00000331436 462 ntBASIC5.2□□□□□ -1.58
GPC3P51654 RNU4-23P-201ENST00000362839 140 ntBASIC5.2□□□□□ -1.58
GPC3P51654 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.2□□□□□ -1.58
GPC3P51654 RNU6-618P-201ENST00000363518 112 ntBASIC5.2□□□□□ -1.58
GPC3P51654 AC136624.1-201ENST00000400791 413 ntBASIC5.2□□□□□ -1.58
GPC3P51654 AL139039.2-201ENST00000407436 479 ntBASIC5.2□□□□□ -1.58
GPC3P51654 RN7SKP267-201ENST00000410381 285 ntBASIC5.2□□□□□ -1.58
GPC3P51654 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC3P51654 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.2□□□□□ -1.58
GPC3P51654 RPS27AP7-201ENST00000422792 455 ntBASIC5.2□□□□□ -1.58
GPC3P51654 RPL23AP1-201ENST00000428990 471 ntBASIC5.2□□□□□ -1.58
GPC3P51654 CNOT7P1-201ENST00000429006 852 ntBASIC5.2□□□□□ -1.58
GPC3P51654 AC016712.1-201ENST00000431088 378 ntBASIC5.2□□□□□ -1.58
GPC3P51654 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC3P51654 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.2□□□□□ -1.58
GPC3P51654 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC3P51654 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC3P51654 snoU13.1-201ENST00000459157 104 ntBASIC5.2□□□□□ -1.58
GPC3P51654 RPL21P6-201ENST00000479171 504 ntBASIC5.2□□□□□ -1.58
GPC3P51654 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC3P51654 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.2□□□□□ -1.58
GPC3P51654 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC3P51654 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC3P51654 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC3P51654 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.2□□□□□ -1.58
GPC3P51654 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC3P51654 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC3P51654 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC3P51654 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.2□□□□□ -1.58
GPC3P51654 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC3P51654 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC3P51654 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC3P51654 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
GPC3P51654 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC3P51654 AC000123.3-201ENST00000624029 4975 ntBASIC5.19□□□□□ -1.58
GPC3P51654 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
GPC3P51654 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
GPC3P51654 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GPC3P51654 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GPC3P51654 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.19□□□□□ -1.58
GPC3P51654 AC005332.5-201ENST00000591222 2919 ntBASIC5.19□□□□□ -1.58
GPC3P51654 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GPC3P51654 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC3P51654 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
GPC3P51654 RNU6-225P-201ENST00000384613 103 ntBASIC5.19□□□□□ -1.58
GPC3P51654 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
GPC3P51654 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC3P51654 AL590762.2-201ENST00000395798 571 ntBASIC5.19□□□□□ -1.58
GPC3P51654 CENPIP1-201ENST00000425713 902 ntBASIC5.19□□□□□ -1.58
GPC3P51654 TMX2P1-201ENST00000436507 708 ntBASIC5.19□□□□□ -1.58
GPC3P51654 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC3P51654 MRPL48P1-201ENST00000445390 636 ntBASIC5.19□□□□□ -1.58
GPC3P51654 AC108463.1-201ENST00000450258 347 ntBASIC5.19□□□□□ -1.58
GPC3P51654 CLIC4P1-201ENST00000453177 535 ntBASIC5.19□□□□□ -1.58
GPC3P51654 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC3P51654 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.19□□□□□ -1.58
GPC3P51654 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.19□□□□□ -1.58
GPC3P51654 BTG4P1-201ENST00000510421 183 ntBASIC5.19□□□□□ -1.58
GPC3P51654 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.19□□□□□ -1.58
GPC3P51654 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.19□□□□□ -1.58
GPC3P51654 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.19□□□□□ -1.58
GPC3P51654 AC107918.3-201ENST00000533272 382 ntBASIC5.19□□□□□ -1.58
GPC3P51654 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.19□□□□□ -1.58
GPC3P51654 MIR4715-201ENST00000584117 79 ntBASIC5.19□□□□□ -1.58
GPC3P51654 RN7SL435P-201ENST00000584418 282 ntBASIC5.19□□□□□ -1.58
GPC3P51654 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms