Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TDGF1P1-201ENST00000445734 527 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC108751.2-201ENST00000469993 231 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC096741.1-201ENST00000472250 846 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC083982.1-201ENST00000485679 344 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC098799.3-201ENST00000506095 438 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC025857.1-201ENST00000525252 377 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.15□□□□□ -1.75
CSNK1A1P48729 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.15□□□□□ -1.75
CSNK1A1P48729 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.15□□□□□ -1.75
CSNK1A1P48729 UBE2FP2-201ENST00000566646 462 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.15□□□□□ -1.75
CSNK1A1P48729 AP001542.1-201ENST00000591314 200 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC130352.1-201ENST00000602979 661 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 COX6CP4-201ENST00000605798 228 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 MIR6853-201ENST00000619642 74 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC010300.1-201ENST00000600671 5134 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CSNK1A1P48729 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CSNK1A1P48729 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CSNK1A1P48729 AC092435.4-201ENST00000623012 4159 ntBASIC4.15□□□□□ -1.75
CSNK1A1P48729 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CSNK1A1P48729 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
CSNK1A1P48729 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CSNK1A1P48729 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CSNK1A1P48729 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSNK1A1P48729 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSNK1A1P48729 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSNK1A1P48729 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSNK1A1P48729 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSNK1A1P48729 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSNK1A1P48729 MIR550A3-201ENST00000390735 95 ntBASIC4.14□□□□□ -1.75
CSNK1A1P48729 AL034403.1-201ENST00000399414 885 ntBASIC4.14□□□□□ -1.75
CSNK1A1P48729 AC007394.1-201ENST00000421941 531 ntBASIC4.14□□□□□ -1.75
CSNK1A1P48729 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.14□□□□□ -1.75
CSNK1A1P48729 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 AL158073.1-201ENST00000426848 1104 ntBASIC4.14□□□□□ -1.75
CSNK1A1P48729 AC097523.2-201ENST00000435551 652 ntBASIC4.14□□□□□ -1.75
CSNK1A1P48729 CALM1P2-201ENST00000452941 448 ntBASIC4.14□□□□□ -1.75
CSNK1A1P48729 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 AC092324.1-201ENST00000468671 324 ntBASIC4.14□□□□□ -1.75
CSNK1A1P48729 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSNK1A1P48729 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 NPM1P35-201ENST00000533043 868 ntBASIC4.14□□□□□ -1.75
CSNK1A1P48729 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 AL110118.1-201ENST00000553543 400 ntBASIC4.14□□□□□ -1.75
CSNK1A1P48729 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 AC090312.1-201ENST00000580637 348 ntBASIC4.14□□□□□ -1.75
CSNK1A1P48729 AC105105.5-201ENST00000622635 1294 ntBASIC4.14□□□□□ -1.75
CSNK1A1P48729 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSNK1A1P48729 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSNK1A1P48729 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSNK1A1P48729 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
CSNK1A1P48729 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSNK1A1P48729 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSNK1A1P48729 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSNK1A1P48729 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSNK1A1P48729 AL355852.1-201ENST00000454081 1771 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSNK1A1P48729 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 SNORA71.2-201ENST00000364941 134 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 RNU6-225P-201ENST00000384613 103 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 MIR298-201ENST00000401212 88 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 AC140479.3-201ENST00000418944 1126 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 AL590762.4-201ENST00000425885 253 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSNK1A1P48729 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 OR7L1P-201ENST00000456181 380 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 SEPT7P6-201ENST00000469999 1143 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSNK1A1P48729 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 PGBD4P4-201ENST00000509673 613 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSNK1A1P48729 OR5D15P-201ENST00000531671 942 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 AP005119.2-201ENST00000579735 1105 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 AC123786.2-201ENST00000603459 275 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 AC098935.2-201ENST00000604222 466 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms