Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM23P36406 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM23P36406 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM23P36406 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
TRIM23P36406 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM23P36406 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM23P36406 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM23P36406 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.74□□□□□ -1.65
TRIM23P36406 AC009643.2-201ENST00000603543 1448 ntBASIC4.74□□□□□ -1.65
TRIM23P36406 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
TRIM23P36406 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM23P36406 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM23P36406 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRIM23P36406 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM23P36406 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM23P36406 MIR708-201ENST00000390708 88 ntBASIC4.74□□□□□ -1.65
TRIM23P36406 RPS4XP9-201ENST00000405151 780 ntBASIC4.74□□□□□ -1.65
TRIM23P36406 RPS16P5-201ENST00000406501 404 ntBASIC4.74□□□□□ -1.65
TRIM23P36406 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM23P36406 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM23P36406 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM23P36406 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM23P36406 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM23P36406 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM23P36406 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM23P36406 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM23P36406 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM23P36406 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM23P36406 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM23P36406 MIR4330-201ENST00000579077 105 ntBASIC4.74□□□□□ -1.65
TRIM23P36406 AC084373.1-201ENST00000603311 235 ntBASIC4.74□□□□□ -1.65
TRIM23P36406 AL158196.1-201ENST00000616786 434 ntBASIC4.74□□□□□ -1.65
TRIM23P36406 AC021106.3-201ENST00000623925 531 ntBASIC4.74□□□□□ -1.65
TRIM23P36406 AC092159.4-201ENST00000624944 550 ntBASIC4.74□□□□□ -1.65
TRIM23P36406 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM23P36406 AC074029.4-201ENST00000624796 1859 ntBASIC4.74□□□□□ -1.65
TRIM23P36406 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRIM23P36406 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM23P36406 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM23P36406 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM23P36406 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM23P36406 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM23P36406 ZFRP1-201ENST00000457579 2970 ntBASIC4.74□□□□□ -1.65
TRIM23P36406 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM23P36406 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM23P36406 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM23P36406 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM23P36406 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM23P36406 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM23P36406 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM23P36406 AC017079.1-201ENST00000333650 415 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM23P36406 RNU6-984P-201ENST00000363236 109 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM23P36406 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM23P36406 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM23P36406 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM23P36406 SNORA56-201ENST00000383966 129 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 RNU6-398P-201ENST00000384143 109 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 HSPD1P16-201ENST00000402302 394 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM23P36406 AL356806.1-201ENST00000422524 916 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 GTF2IP2-201ENST00000424290 697 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 FAM204CP-201ENST00000424489 642 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM23P36406 TRIM60P13-201ENST00000432350 1283 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 AC093716.1-201ENST00000435923 377 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM23P36406 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM23P36406 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM23P36406 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM23P36406 AC022431.1-201ENST00000450941 438 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM23P36406 AC025181.1-201ENST00000477507 416 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM23P36406 AC073358.1-201ENST00000505671 684 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 AC091868.1-201ENST00000508746 304 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
TRIM23P36406 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM23P36406 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM23P36406 AL110118.1-201ENST00000553543 400 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 AL049830.4-201ENST00000555149 351 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM23P36406 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM23P36406 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM23P36406 AC022106.2-201ENST00000620114 757 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 AC090971.4-201ENST00000560291 1800 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM23P36406 AL445487.1-201ENST00000415694 1580 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 AC007342.7-201ENST00000624610 2337 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
TRIM23P36406 AL442639.1-201ENST00000625030 1899 ntBASIC4.73□□□□□ -1.65
TRIM23P36406 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM23P36406 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM23P36406 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM23P36406 AC010928.1-201ENST00000592477 1447 ntBASIC4.72□□□□□ -1.65
TRIM23P36406 OR51C1P-202ENST00000641159 1444 ntBASIC4.72□□□□□ -1.65
TRIM23P36406 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM23P36406 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM23P36406 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms