Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SHMT2P34897 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.5□□□□□ -1.69
SHMT2P34897 DHX40P1-201ENST00000588725 1412 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 AC010300.1-201ENST00000600671 5134 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.5□□□□□ -1.69
SHMT2P34897 OR4K15-201ENST00000305051 1216 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHMT2P34897 RNU6-697P-201ENST00000363348 107 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHMT2P34897 RNU6-398P-201ENST00000384143 109 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SHMT2P34897 AL049697.2-201ENST00000403708 294 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SHMT2P34897 AC009237.10-201ENST00000414112 510 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.5□□□□□ -1.69
SHMT2P34897 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.5□□□□□ -1.69
SHMT2P34897 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.5□□□□□ -1.69
SHMT2P34897 RN7SL354P-201ENST00000469282 294 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 RN7SL205P-201ENST00000490174 284 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 RPL23AP72-201ENST00000492447 435 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHMT2P34897 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.5□□□□□ -1.69
SHMT2P34897 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.5□□□□□ -1.69
SHMT2P34897 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.5□□□□□ -1.69
SHMT2P34897 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.5□□□□□ -1.69
SHMT2P34897 AC234771.5-201ENST00000600161 514 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.5□□□□□ -1.69
SHMT2P34897 AC073091.2-201ENST00000603205 907 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 RN7SL722P-201ENST00000617780 284 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 RN7SL565P-201ENST00000618246 284 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.5□□□□□ -1.69
SHMT2P34897 AC004232.3-201ENST00000622977 525 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHMT2P34897 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SHMT2P34897 AC107027.3-201ENST00000565095 3473 ntBASIC4.5□□□□□ -1.69
SHMT2P34897 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.5□□□□□ -1.69
SHMT2P34897 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHMT2P34897 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHMT2P34897 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SHMT2P34897 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.5□□□□□ -1.69
SHMT2P34897 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SHMT2P34897 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHMT2P34897 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHMT2P34897 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.49□□□□□ -1.69
SHMT2P34897 SNORD113.2-201ENST00000364166 89 ntBASIC4.49□□□□□ -1.69
SHMT2P34897 SDHCP2-201ENST00000398565 501 ntBASIC4.49□□□□□ -1.69
SHMT2P34897 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHMT2P34897 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHMT2P34897 HDGFP1-201ENST00000405943 252 ntBASIC4.49□□□□□ -1.69
SHMT2P34897 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.49□□□□□ -1.69
SHMT2P34897 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.49□□□□□ -1.69
SHMT2P34897 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.49□□□□□ -1.69
SHMT2P34897 HMGB3P9-201ENST00000441799 583 ntBASIC4.49□□□□□ -1.69
SHMT2P34897 CEACAMP6-201ENST00000452007 574 ntBASIC4.49□□□□□ -1.69
SHMT2P34897 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SHMT2P34897 AC008897.1-201ENST00000494006 347 ntBASIC4.49□□□□□ -1.69
SHMT2P34897 MTND4LP2-201ENST00000502312 285 ntBASIC4.49□□□□□ -1.69
SHMT2P34897 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.49□□□□□ -1.69
SHMT2P34897 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.49□□□□□ -1.69
SHMT2P34897 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.49□□□□□ -1.69
SHMT2P34897 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
SHMT2P34897 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
SHMT2P34897 ATP5J2P6-201ENST00000565203 266 ntBASIC4.49□□□□□ -1.69
SHMT2P34897 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.49□□□□□ -1.69
SHMT2P34897 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.49□□□□□ -1.69
SHMT2P34897 MIR4330-201ENST00000579077 105 ntBASIC4.49□□□□□ -1.69
SHMT2P34897 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.49□□□□□ -1.69
SHMT2P34897 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.49□□□□□ -1.69
SHMT2P34897 COX6CP4-201ENST00000605798 228 ntBASIC4.49□□□□□ -1.69
SHMT2P34897 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.49□□□□□ -1.69
SHMT2P34897 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHMT2P34897 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SHMT2P34897 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.49□□□□□ -1.69
SHMT2P34897 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHMT2P34897 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SHMT2P34897 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHMT2P34897 AC135352.1-201ENST00000506173 1418 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.48□□□□□ -1.69
SHMT2P34897 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHMT2P34897 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHMT2P34897 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.48□□□□□ -1.69
SHMT2P34897 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHMT2P34897 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.48□□□□□ -1.69
SHMT2P34897 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHMT2P34897 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.48□□□□□ -1.69
SHMT2P34897 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHMT2P34897 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.48□□□□□ -1.69
SHMT2P34897 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.48□□□□□ -1.69
SHMT2P34897 AC092570.3-201ENST00000420113 693 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.48□□□□□ -1.69
SHMT2P34897 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.48□□□□□ -1.69
SHMT2P34897 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.48□□□□□ -1.69
SHMT2P34897 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.48□□□□□ -1.69
SHMT2P34897 PPIAP13-201ENST00000434706 478 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 AC011753.3-201ENST00000443436 406 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 SCARNA10-201ENST00000459255 330 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.48□□□□□ -1.69
SHMT2P34897 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.48□□□□□ -1.69
SHMT2P34897 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms